Carya illinoinensis (pecan): 122281020
Help
Entry
122281020 CDS
T08745
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122281020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122281020
03036 Chromosome and associated proteins [BR:
cill03036
]
122281020
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122281020
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122281020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122281020
NCBI-ProteinID:
XP_042948143
LinkDB
All DBs
Position
11:complement(32833297..32845010)
Genome browser
AA seq
1039 aa
AA seq
DB search
MFGSSNPFGQSSSSPFGSPSVFGQNNNANNNPFAPKPFGSPTPFGSQTGGSIFGGTSTGV
FGTAQSSSPFSSTTAFGASSSPAFGNTVPAFGASSTPAFGSTVPAFGASSTPAFGGSSIF
GQKASFGGFGSTSTPASPFGSTNQQSQPAFGSSIFGSSSPFGATSQSAFGASSTPAFGAT
TTPAFGATTTPAFGASSAPAFGATSTPAFGATSTPAFGTTASPAFGSTGTAFGVSNAPVF
GSGGAFGASSSPLFGSSSTPMFGTSSTPAFGTSSTPAFGSSSTPAFGTSSTPAFGASSTP
AFGASSTPSFNFGSSPAFGQSASAFGSTPFGTTTTPFGAQSSPFGAQPTTPAFGSTGFGQ
APFGTQRGGSRVAPYTPTTEADSGTQAAGKLESISAMPVYKDKSHEELRWEDYQLGDKGG
PLPATSQPAGGMGFSSTPANSNILGPSTTFGQSSASPFSASMPSNPFAPKTPSIGGLNFG
SSTTPTFSSSPFSASTSSGLFGSTSLQTSSTFGVGSSPSLFGSSTPLFSSGPSQATNTAF
GSNTQSSPLFQSSAPSIGQTGSAFGQTTTSFGQGMSSPFGQGMLGASTPGFGVNTFSSTP
SLINSSNTLGFGQSNPSFSMPFQPSQPAQTNTTFGLGNFGTTQPAGGSLFGGTPGILGQS
NFGQLSATQSSAVAQPMPAVNPFGTLPAMPQMSIGRVGTGPSIQYGISALPVVDKPAPVR
ISSLLTSRHLSQRRIRLPARKYHAKNDGPKVPFFSDDEETPSTPKADALFIPRENPRALV
IRPMEQSPLRASAEKASPLKDISTPVHENGKIYREAHVPPQGGSNSVDKDKNPIENGQAR
ENVHVLKVNQKANGVHEDHFVQKGDSYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDY
YTEPRVQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFLGDTDVRRLDLEALVQFNNREV
IVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGKQYTEGAKIEKYKEMLKRKAEDQGA
EFVSYDPIKGEWKFRVNHF
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcgagtaacccttttgggcagtcatctagtagcccatttgggtccccatca
gtctttgggcagaacaacaatgcaaataacaatccttttgctccaaaaccctttggtagc
ccaaccccttttggatcacaaactgggggttctatatttgggggtacttcaacaggagtg
tttggcacagcccaatcttcttcacctttctcttcgacaaccgcttttggtgcttcatca
tccccagcttttgggaacacagtgcctgcttttggagcatcttctacccctgcttttggg
agcacagtgcctgcttttggagcatcttctactcctgcttttggtggatcctctatcttt
ggtcagaaggcttcttttggagggtttggatccacttctactccagcaagcccctttgga
agcacaaatcaacaatcacaaccagcatttgggagtagcatatttggttcctcctcacca
tttggtgcgacaagtcagtctgcgttcggtgcaagtagcactcctgcatttggtgctaca
accacccctgcatttggtgctacaaccaccccagcatttggtgcttcgagcgcccctgcc
tttggtgctacaagcacgcctgcttttggtgctacaagcaccccagcctttggtacaaca
gcaagccctgcatttggtagcacagggactgcatttggtgtgtcaaatgctcctgtattt
ggatctggtggagcatttggagcatcaagcagccctttatttggttcctcaagcactcct
atgtttggtacctcaagcactccagcatttggtacctcaagcactccagcattcggctcc
tcaagcactcctgcgttcggtacctcaagcactcctgcttttggggcctcaagcactcct
gcttttggggcttcaagtaccccctccttcaactttgggtcctctccagcttttggccaa
tcggcttctgcatttggtagcaccccatttggtacgacaactactccttttggagcccag
agctctccatttggagcccagcccacaacaccagcatttggcagcactggctttgggcag
gcaccttttgggactcaacgtgggggaagtagagtagctccttacacgccaacaactgaa
gctgatagtggtacccaggctgctgggaagttagagtccatatcagccatgcctgtctac
aaagataaaagccacgaggagctgagatgggaggactatcaattgggagataaaggtgga
ccacttcctgccacttctcagcctgctggtgggatgggatttagttcgactcctgcaaat
tcaaatattcttggtccttctacaacatttggccaatcatctgcgagtcctttctctgcc
tcaatgccttccaacccgttcgcaccaaaaactcctagcattggtggtttgaattttgga
agctcaactactcctacattcagttcttcacctttcagtgcatcaacttcatctggcctt
tttggatcaacatcattacaaacatcatctacgtttggtgttggctcatccccatcactt
tttggttcatccacgcccctctttagttctggaccatctcaggcaacaaatacagcattt
ggtagtaacactcagtcatctccattattccaatcctctgcaccttcaattgggcagacg
ggctctgcttttggacagacaactacttcctttgggcagggtatgagttcacccttcggt
caaggaatgcttggtgcttctaccccaggatttggtgtaaacactttctcgagcacccca
tcgcttattaattcgagcaacacattaggctttggtcaatcaaatccctctttttcaatg
ccttttcaaccatctcagcctgctcagacaaatactacttttggccttggcaattttggt
acaacacaaccagctggtggaagtctctttggtggaacgccaggcattttgggtcagagt
aactttggacaattatctgctactcaaagctctgcggttgctcaaccaatgccggctgta
aatccatttggaacactccctgcaatgcctcaaatgtcaattggtcgtgttggaacagga
ccttcgattcaatatggaatttctgccttgcctgttgttgataaacctgctcctgttaga
atctcatcattactgacctctcgacacctgtcacaaagacggattaggttgcctgcaagg
aaatatcatgctaagaatgatggtccaaaggttcctttctttagtgatgatgaagaaaca
cccagcacaccaaaggcagatgctcttttcattcctagggaaaacccaagagcactggtc
attcgtcccatggagcagtcacctctgagagctagtgctgagaaagcatctccattgaag
gatatatctactccagttcatgagaatgggaaaatttatcgagaagcccatgttcctccc
caaggtggctccaactctgtggataaagataaaaatcccattgaaaatggccaagcaagg
gaaaatgttcatgttctcaaagtaaaccagaaagcaaatggagttcatgaagatcatttt
gttcaaaaaggagattcttacatgacactcagtggacatcgagctggtgaggctgccatt
gtatatgaacatggggctgacattgaggcactaatgccaaagctccggcgttctgattac
tacacggagcctcgagtccaagaattagcagccaaggaaagggctgaaccagggttctgc
cgccatgtcaaggactttgtggttgggcgtcatggctacggcagcatcaagttcttgggt
gacacagatgtgcggcggcttgatcttgaggctcttgttcagtttaataaccgtgaggtg
attgtttacatggatgacagcaagaaacctcctgtaggacaaggtctaaataagcctgcc
gaggtaacacttctaaacataaaatgctttgacaagaagactggaaagcagtatacagaa
ggggcaaaaattgaaaaatacaaggagatgctgaagcgaaaggctgaagatcaaggcgcc
gagtttgtgtcctacgaccccatcaaaggagagtggaagttcagagtcaatcacttctga
DBGET
integrated database retrieval system
