Carya illinoinensis (pecan): 122281066
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Entry
122281066 CDS
T08745
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122281066
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122281066
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
U-box type E3
122281066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4
SHOCT
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122281066
NCBI-ProteinID:
XP_042948243
LinkDB
All DBs
Position
11:complement(25695730..25704230)
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AA seq
845 aa
AA seq
DB search
MAVYYKFKSARDYDSIPMDGPFISVGTLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRLPIVTGQEPKVENKMDEAEPENTSLPVTDASTMKYPEDSE
WDEFGNDLYAIPEVLPVKSNNLILEALPTNIADEESKLKALIDTPALDWQRQGPDGYGTG
RGFGRGIGGRMGGRGFGRAGFERKTPPPGYICYRCKVPGHFIQHCPTNGDPSFDIKRVKP
PTGIPKSMLMATPDGSYALSSGAVAVLKPNEAAFEREIEGLPSTRSVGELPPELHCPLCK
EVMKDAVLTSKCCFESFCDKCIRDHIISKATCVCGAKNILADDLLPNKTLRDTINRILEG
GNSSADNAGSTFQVQDMESARCPQPKIPSPTLSAASKGEHKPSPVNEETPHIRDNTDGGK
AGTAPQQIAERVRTAKTAMSEATRESVSVKEPAASQGSAPLAEEEVQQKVAISEAGKKKK
KKKLRMPSNDLQWKTSQDLAAENYMMPFGPSAFNPYWTGMQPSMDMYMAPYPGTMPFTGY
GPGPFDMPFGGIVPQDPFAGQYMFPPVPPQRDLSEFSMGMNGPPPIMSREEFEARKADLI
RKRENERRGEREFSKDREFGREVSSSGDISSMKLKSKPVPSSSSADHHSQQRLRSERSPD
RPARELEPPQRPAKRKSDHHHSREYEREHDRDRHHRSESSVRPSSEASAKAAAIAAAVDR
KQKASVFSRISFPPEEVSKKRKLSSSTEAPPGKASANGYYDDYKSTSTKGAASVTSGGGG
GGGGGGNGRKSSSAVEYESSDEDRHFKRKPSRYEPSPPPPPQVEWEEEGRHHSRGSRERE
RSKHR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtattataaatttaagagtgcaagagattacgattcaattcccatggatggt
cctttcatctcagttggtaccttgaaagaaaaaatttttgaatccaaacacttgggtagg
ggtaccgatttcgaccttgtggtcaccaacgcccagactaatgaagaatatcttgatgaa
gcaatgttgattcctaaaaatacctcagttttaattcgtcgagttcctggacggccacgt
ttgcccattgtcactggacaagagccaaaggtagaaaataagatggacgaggctgaacca
gaaaatactagcttaccagttactgatgcttctaccatgaaatatcctgaggactcagaa
tgggatgagtttgggaatgatttatatgcgattcctgaagttctgcccgttaagtccaac
aatctaattctggaagctctccctaccaatatagctgatgaggagagcaaacttaaagct
ctaattgatactccagccttggactggcagcgtcaaggtcctgatggctatggcactggc
agaggttttggaaggggtataggtggtagaatgggtgggcgtggttttggtcgagcaggg
tttgagcggaaaacacctcctcctgggtatatatgttacaggtgcaaggtgcccgggcac
tttattcagcactgccctacaaatggtgatccaagttttgacatcaaaagggtgaaaccg
ccaactggtataccgaagtccatgctgatggctaccccagatggttcatacgcattatca
agtggtgcagtagcagtcttgaaaccaaacgaggctgcttttgagagagaaattgaaggg
ttaccatccacacgttctgttggcgagctaccacctgagcttcactgcccgctgtgtaag
gaagtaatgaaagatgctgtgctgacaagcaagtgttgttttgagagcttttgtgataaa
tgtattagggaccacataatatcgaaggcaacatgtgtatgtggggcaaaaaacattctt
gcagatgatctcctgccaaataagacgctcagggatacaatcaaccgaatattggagggt
ggtaacagcagtgctgacaatgctggaagtacatttcaagttcaagatatggagtctgca
cgctgtccccagcccaagattccatcgccaactttatctgctgcgtcaaagggtgaacat
aagccatcacctgttaatgaagaaaccccacacatacgtgacaatacagatggtgggaag
gctggtactgctccacagcagatagcagagagagtgaggactgcaaaaacagctatgtct
gaggctacacgggagtcagtgagtgtgaaggaacctgcagcatctcaggggagtgctccc
ttagctgaggaagaagtgcagcagaaggtggcaattagtgaggctgggaagaaaaagaaa
aagaagaaattacgcatgccatcgaatgatttgcagtggaaaacgtctcaagatcttgca
gctgagaattatatgatgccttttggtccttctgccttcaatccatactggactggcatg
caacccagcatggatatgtatatggcaccatatcccggaaccatgccttttacaggttat
ggaccaggcccctttgacatgcctttcgggggtattgtaccacaggacccatttgctggg
caatatatgttccctcctgttccacctcaaagggatctttcagagttcagtatgggtatg
aatggtccacctccaatcatgagccgagaggaatttgaggcacgaaaagctgatttgatt
agaaagcgtgaaaatgagagacgaggtgaaagggagttctccaaagatcgggagtttggt
agggaagtgagcagcagtggcgatatttcttcaatgaaattgaaatctaagcctgttccc
tcttcgtcaagtgctgatcaccactcccagcagcgtctccgatccgagagatcgccagac
cggcctgcacgcgagctcgagccaccccagcgccctgccaagagaaaatccgaccaccat
cacagtcgtgagtatgagcgcgagcacgatcgcgaccgtcaccaccgttcagaatcttct
gtcagaccctcctcggaagcatcagccaaagccgccgcaattgctgctgcggtagaccgc
aaacagaaagccagtgtgttctcccgcattagcttcccgcccgaagaagttagcaagaag
agaaagctctcgtcctcaaccgaggcaccaccaggcaaggcttcggcaaatgggtattac
gacgactataaatcgacttcgacaaagggtgctgcttctgtaactagcggcggcggcgga
ggaggaggaggaggaggaaatgggaggaagagtagtagtgccgtggagtacgagtcgagc
gacgaggataggcatttcaagaggaagccgtcgaggtacgagccgtcacctcctccaccg
ccgcaggtggagtgggaggaggaagggaggcatcattcgagaggttccagggaacgggag
cggagcaaacacagatag
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