Carya illinoinensis (pecan): 122281353
Help
Entry
122281353 CDS
T08745
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial-like isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03030
DNA replication
cill03410
Base excision repair
cill03420
Nucleotide excision repair
cill03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122281353
03410 Base excision repair
122281353
03420 Nucleotide excision repair
122281353
03440 Homologous recombination
122281353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122281353
03400 DNA repair and recombination proteins [BR:
cill03400
]
122281353
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122281353
DNA replication proteins [BR:
cill03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
122281353
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
122281353
NER (nucleotide excision repair)
GGR (global genome repair) factors
122281353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
122281353
NCBI-ProteinID:
XP_042948695
LinkDB
All DBs
Position
11:complement(43107334..43125836)
Genome browser
AA seq
1065 aa
AA seq
DB search
MAMGLSPQPRPLNPRPSWASYSLFSPSSSISSSSSRSLLFSSKSLHINIGTDIRQGECTF
YHDKNYNTRSICWRLRHIPPCYSTVKMVPCYMDRDNSTGSLLKKPIIDPQKVDKEGEHVL
GNFSGPLSQEIGGSNPHRRDAFAMHGGSRVTLESWKRETEMMRITRKLELEALKRVSDPR
HKTCSRANILSSSGGILINTPTDLAPSDSASDLASAEIESGGDGNIVVKDVNGLKLDQSR
YLEEIKETNSGLIKPSTSKQAYCQPDLHERLGSIYDSVLIVDDATVAKEVVGMLTNKYRH
LVHACDTEVAKIDVKQETPVDHGEIICFSIYSGPEVDFGNGKSFVWVDVLDGGGRDLLIA
FAPFFEDPSIKKVWHNYSFDNHVIENYGLKLSGFHADTMHMARLWDSSRRTMGGYSLEAL
TGDKRVMSGAELCHEEELFGKVSMKTIFGRRKLKIDGSEGKMIILSPVEELQREERKPWI
CYSVLDAKSTLKLYESLKSHLSNMPWKLDGKPVSVKSMFDFYEEYWQPFGDLLVKMETEG
MLVDRAYLAEVEKVAKAEQVIATNRFRNWATRYCADAKYMNVGSDTQLRQLLFGGIANRK
DPDECLPNERIFKVPNVHQVIEDGEKTPPKFRNIRLHSIRDNPLPAEMFTASGWPSVSGD
ALKALAGKVSAEYDFMSDSFDLQLDDNVENTAENEVSEKQKSTGDVNKSAYGKAFLAFEK
EEEGREACHAISALCEVCSIDSLISNFILPLQGINISGKNERIHCSLNINTETGRLSARR
PSLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLASCKSMLDAFRAGGDF
HSRTAMNMYPYIREAIDKKQVLLEWHPQPGEDKPPVPLLKDAFASERRKAKMLNFSIAYG
KTPVGLARDWKVSVKEAKKTVDLWYSNRKEVLAWQEERKQEARDKQFVCTLLGRARRFPS
MAHATTYQKGHIERAAINTPVQGSAADVAMCAMLEITKNARLKELGWKLLLQVHDEVILE
GPTETAEVAKAIVVECMSKPFNGKNILKVDLSVDAKCAQNWYSAK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggctatggggttatccccccaaccccgtcccctgaacccgagaccgtcttgggcctct
tattccttattttccccgtcttcttccatctcttcttcctcttctcggtccctcttgttc
tcctctaaatccctgcacattaatattggtactgatatcagacaaggagagtgcacattc
taccatgacaagaattataacactagatctatttgttggaggctcaggcacatacctcct
tgttattccacagttaagatggtcccttgctacatggatcgagataattcaactggaagc
ctcttgaaaaaaccaatcattgacccccaaaaggtagataaagaaggggagcatgttctg
ggaaattttagtggaccactatctcaggagattgggggtagtaatcctcacagacgtgat
gcttttgctatgcatggtggctcaagggtcactttagagtcatggaaacgagagactgaa
atgatgagaattacaaggaaacttgagctggaggctttgaaacgtgttagtgatccacga
cataaaacttgtagtcgagcaaacatattgtcttcaagtggtggcatccttattaatact
cctaccgatcttgcaccatctgactcagcttctgacctagcttctgctgaaatagagagt
ggaggagacggaaatatagttgtgaaagatgttaatggtctcaaacttgaccagtcaagg
tacttggaggaaataaaagaaacaaattctggattaatcaaaccctccactagtaaacag
gcatattgccagccagatcttcatgagagactaggcagcatctatgacagtgttcttatt
gttgatgatgccactgtagcaaaggaggttgttgggatgcttacaaataagtacaggcat
cttgtccatgcttgcgataccgaggttgcaaagatagatgtgaagcaagaaacacctgtt
gatcacggggagattatatgcttcagtatatattctggacctgaagtggattttggaaat
gggaagtcttttgtttgggttgatgttcttgatggtggtggtagggatcttttgattgcc
tttgctcctttctttgaagacccatccatcaaaaaggtttggcacaactatagctttgat
aaccacgttattgaaaactatgggcttaagctttctggttttcatgctgacacaatgcat
atggcacgattgtgggattcatcaagaagaactatgggcgggtattctcttgaagcactt
actggtgacaagagggttatgtctggggctgaattatgccacgaagaagagttgtttggt
aaagtttctatgaaaacaatctttggcaggagaaagcttaaaatagatggatcggaaggt
aaaatgatcatcctttcccctgttgaagagctacaaagagaagagcggaaaccatggatt
tgttattctgtattagatgcaaaaagcacactaaagctttatgagagcttgaaaagccat
ctatcaaatatgccatggaaacttgatggaaaaccagtttctgtaaaatccatgtttgac
ttctatgaagaatactggcaaccatttggtgaccttttggttaaaatggaaactgaggga
atgctggttgatcgagcatatcttgctgaggtggagaaggtagccaaagcagaacaagtg
attgctactaatagatttcgcaactgggcaaccagatattgcgctgatgccaagtacatg
aatgtgggaagtgatacacaactacgccagctactttttggtggcattgcaaacagaaag
gatcctgacgagtgtctaccaaatgagaggatcttcaaagttcctaatgttcatcaagtg
attgaagatggcgagaagactcccccaaaatttcgaaatattaggctgcacagcatccgt
gacaatccactaccagctgagatgttcacagcaagtggttggccatcagttagtggtgat
gctttgaaggccctggctggaaaggtttctgcagagtatgattttatgagtgattctttt
gacttgcaactggatgacaatgtagaaaataccgctgaaaatgaagtttcagaaaaacaa
aaatcaactggtgatgtcaacaaatctgcttatggaaaagcttttctagctttcgaaaaa
gaagaggaggggagggaggcttgtcatgccatttctgcattatgtgaagtttgctccatt
gactccttgatatccaacttcatactccccttgcagggaattaatatatcaggcaagaat
gagcgtattcattgttcattaaatatcaacacggaaactgggcgcttatcagctaggagg
ccaagtttacagaatcagcctgctttagagaaggatcggtataagatccgtcaggcattc
attgctgcaccggggaattcccttattgttgcagattatggacaactggaacttcggatt
cttgcccatcttgctagttgtaaaagtatgctagatgctttcagagccggtggagatttc
cattcaaggactgcaatgaatatgtacccttatattcgtgaagcaattgacaaaaagcaa
gtgcttcttgagtggcaccctcaacctggtgaagataaacccccagttccactattaaag
gatgcctttgcttctgaaagaaggaaagctaaaatgctcaacttttctattgcatatgga
aaaactccagtggggcttgcccgagattggaaggtttctgtcaaggaagcaaagaaaacg
gtcgatctatggtacagcaatagaaaagaagtgcttgcctggcaagaagaacgtaaacaa
gaggcccgtgataaacagtttgtatgcacattgctaggacgtgcccgccggttcccttca
atggcccatgctaccacctatcaaaaaggtcacattgagcgagctgctatcaatacccca
gtgcagggtagtgctgctgatgttgccatgtgcgccatgttagaaataacaaaaaatgca
cggttgaaggagctagggtggaagctgcttttacaggtccatgatgaagtaatcttggaa
ggaccaacagagacagctgaggtcgcaaaggccatagttgttgagtgtatgtccaaaccc
ttcaatggcaagaatattcttaaagttgacttatcggttgatgcaaagtgcgctcaaaac
tggtattctgccaagtag
DBGET
integrated database retrieval system
