Carya illinoinensis (pecan): 122281359
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Entry
122281359 CDS
T08745
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122281359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122281359
03110 Chaperones and folding catalysts [BR:
cill03110
]
122281359
03029 Mitochondrial biogenesis [BR:
cill03029
]
122281359
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122281359
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
122281359
Messenger RNA biogenesis [BR:
cill03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
122281359
Chaperones and folding catalysts [BR:
cill03110
]
Heat shock proteins
HSP60 / Chaperonin
122281359
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
122281359
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122281359
Exosomal proteins of other body fluids (saliva and urine)
122281359
Exosomal proteins of breast cancer cells
122281359
Exosomal proteins of colorectal cancer cells
122281359
Exosomal proteins of bladder cancer cells
122281359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
122281359
NCBI-ProteinID:
XP_042948707
LinkDB
All DBs
Position
1:complement(49954578..49961176)
Genome browser
AA seq
574 aa
AA seq
DB search
MHRIVSKVASTITSRTSRKLVCNRVICSRNYGAKAIKFGVGARAAMLQGVSEVAEAVKVT
MGPKGRNVIIEKSHGDPKVTKDGVTVAKSISFKEKAKNVGADLVKQVASATNTAAGDGTT
CATVLTQAILMEGCKSIAAGVNVMDLRSGINMAVDTVISDLKSKALMISTPEEIKQVATI
SANGEYEIGDLIARAMEKVGKEGVITVVDGNTLDNELEVVEGMKLGRGYISPYFVTDQKT
QKCELENPLILIHDKKISDMNSLLRILEPAVQKNRALLIVGEDVDSEALAMLILNKHRAG
LKVCAIKAPGFGENRRANLDDLAILTGGEVITEDRGLTLDKVHFEMLGTAKKVTVSLDET
IILHGGGDKKLIEERCEQLRTAIEKSTATFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYAGKVLENLQTENEDQKRGIKIIQNALKAP
TFTIASNAGFDGAVVIGKLLEQDDRNFGFDAAKGEYVNMVEQGIIDPLKVVRTALVDAAS
VSLLLTTTEAAVVDHQDEKHKPPSRMPNLDDMGY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaatagtttcgaaagtagcttcaacgatcacttcacgcacttcaagaaaatta
gtgtgtaacagagtcatatgcagcagaaattatggggcgaaagccatcaagtttggagtt
ggggctcgggcagcaatgctgcagggggtttccgaggtcgcagaagctgtcaaagtcaca
atgggaccaaagggtcgcaatgtgataattgaaaaaagtcatggggatcccaaagtgaca
aaggatggcgtcactgttgccaaaagtatcagcttcaaggaaaaggccaaaaatgttggc
gcagatcttgtaaagcaggttgcaagtgctactaatactgctgctggagatggtactaca
tgtgcaactgtcctaactcaggcaatactcatggaaggttgcaagtcaatagctgctggt
gtgaatgtgatggatttgcgtagtggtatcaatatggccgttgatactgttatatctgat
ctgaaaagcaaagcattgatgattagcacaccagaagaaattaaacaggttgccactatt
tccgctaatggtgaatatgagattggggatttgatagcaagagcaatggagaaagttgga
aaggaaggggtcattactgttgtggatgggaatactttggataatgagttggaagtggtg
gaaggaatgaagctaggcagaggctacatatctccttattttgtgactgatcagaagacc
cagaaatgtgaactagagaacccactaatcctcatccatgacaagaaaatttcagacatg
aattcacttctgagaatattggagcctgcagtgcagaaaaatagagcacttcttattgtg
ggtgaggatgttgatagtgaggcactggctatgcttatactcaacaagcatcgtgctggg
ctcaaggtttgtgccattaaagctccaggttttggagaaaatagaagagcaaatttagat
gatcttgccattcttactgggggagaggtcattactgaagaccgtggtttaacccttgac
aaagtccattttgaaatgctgggtactgcaaaaaaggttaccgtctctcttgatgaaaca
ataattctacatgggggtggagataagaagctgatcgaagaaagatgtgagcagctgaga
acagctattgagaagagtactgccacgtttgacaaggagaaagcacaggaaaggctatca
aagctatctggtggtgtggctgttttcaaggttggaggggctagtgaggcagaagttgga
gaaagaaaagatagggtaaccgatgctttaaatgctacaagagcggctgtggaagagggt
attgtgccaggtggtggtgttgccctcttgtatgctggaaaagttttggagaaccttcaa
actgaaaatgaagaccagaagagaggaataaagataatccagaatgctcttaaggcacct
acattcacaatagcctcaaatgctggttttgatggtgctgttgttatcggcaaattgttg
gaacaagatgatcgtaattttgggtttgatgctgctaaaggtgaatatgtcaacatggtg
gagcagggaataatagatcctctcaaagttgttagaacggctctggtagatgctgccagc
gtgtcgttgctactgacaacaaccgaggcagccgttgtggatcatcaggacgagaaacac
aaacctccgagccggatgccaaatttggatgatatgggctactag
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