Carya illinoinensis (pecan): 122281465
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Entry
122281465 CDS
T08745
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04016
MAPK signaling pathway - plant
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122281465
04075 Plant hormone signal transduction
122281465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122281465
Transcription factors [BR:
cill03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122281465
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
Bap31_Bap29_C
PUMA_CC
bHLH_INO4
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
122281465
NCBI-ProteinID:
XP_042948884
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All DBs
Position
11:complement(29999483..30002134)
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AA seq
682 aa
AA seq
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MHGMTDYRITPSMNLWTSEDNPSVIESFMSSDLSFWPTPPPPPHQAQQLQPQSSASTSAD
PTKALPQSQPSGALFNQETLQQRLQALIEGARESWTYAIFWQSSYDYSGASILGWGDGYY
KGDDDKSKGKAKTTSSAAEQEHRKKVLRELNSLISGSAASAADDTVDEEVTDSEWFFLVS
MTYSFVSGDGLSGQAFFNSSPVWVAGADRLTDSPCERARQGQVFGLQTMVCIPSANGVVE
LGSTELILHSSDLMNKVRDLFNFDSLEMGGSWPVTDQGENDPSSLWINDPTPAAPMEIKD
SLNSTTVPSVPGTTNIGLQISKAIQFENPSSSSLTENPSAIHMPNTNQNHQQRQQSQTQS
FFTRELNFSDYGYDGSSVVKNGNPNQLKPGSGEILNFGESKRSSYVSGHSQFVAPAVEEN
NKKKRTQSRGSNEEGMLSFTAGVILSNDCVVKSSGGGGMADSEQSDLEASVAKEADSSRV
VDPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGD
AIMYINELKGKLQSTESDKEDLQKQLEGLKKEFAGKEPRYPGSVPSPPLSDKDSRTSRLI
DLDIDVKIIGWDAMIRIQSSKKNHPAARLMAALKELDLDVHHASVSVVNDLMIQQATVKM
GSRFYNQEQLRLALSAKVGDSR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaatgacagattatcggataacaccgtcgatgaatctgtggacgtccgaagac
aacccatcggttatagagtctttcatgagctcggatctctcgttctggcccacgcctcct
cccccccctcatcaggctcagcagctgcaacctcaatcctccgcttccacatctgccgac
cccacaaaggccctcccgcaatcccagccctccggggcgctcttcaaccaggagaccctc
cagcagcgccttcaagcactcatcgagggtgcccgtgagagttggacctacgccatcttc
tggcagtcctcttacgactattccggcgcatccatcttgggctggggcgacggctactac
aagggtgacgatgacaagtcaaaagggaaggccaagacgacgtcgtctgcggcagagcag
gaacaccgcaagaaggtgctccgcgagctcaattctctgatctcaggctccgccgcgtcc
gccgctgacgataccgtcgacgaagaggtcaccgactccgaatggttcttcctggtgtcc
atgacttattccttcgtcagcggcgacggcctctccggccaggcttttttcaattcgagt
ccggtctgggtagctggagcggaccgcctgaccgactcgccgtgcgaacgcgcccgtcaa
gggcaggtattcggtcttcagaccatggtgtgcataccctcggcgaacggcgtcgtggag
ttgggctccacggagttgattttacatagctcggatctgatgaataaagttagagatctc
ttcaatttcgacagcctggaaatgggtggttcctggcctgttaccgaccaaggcgagaac
gacccatcttctctctggattaacgatcccacaccggctgctcctatggagatcaaagat
tcgcttaatagcactactgtaccatcggttcctggcaccaccaacatcggccttcagatt
tcaaaggcgattcagtttgagaaccctagctccagtagtttgacagagaaccccagcgcg
attcatatgccaaacactaaccaaaaccaccagcaacgccagcaatcgcagacccagagc
ttctttaccagagagttgaacttttcggactacggatacgacggtagtagtgttgtgaag
aatggcaatccgaatcagttgaagccaggatcgggggagattttgaatttcggggagagc
aagaggagctcctatgtttcgggccattcccagttcgtcgccccggcggtggaggagaat
aacaagaagaagcggacccaatcgaggggtagtaacgaagaggggatgctttcttttacg
gcaggtgtcattttgtcgaacgactgtgtggtgaagtcgagcggcggcggcggcatggcc
gattcggagcagtccgacctcgaagcgtcggttgctaaagaggctgatagtagccgagtc
gtagacccggagaagcggcctcgaaaacgtggtcgaaaaccggcaaacgggagagaagaa
cctctgaatcacgtggaagcagagaggcagagaagagagaagctcaaccagaggttctac
gctctccgtgcggttgttccgaacgtttcgaaaatggacaaagcgtcccttctcggggac
gcaataatgtatataaacgagttgaaagggaagcttcagagtacggagtcggacaaggaa
gacttgcagaagcaattggagggattaaagaaggaatttgccggcaaagaaccccgctat
ccgggctccgtaccttcccctccgctgtcggataaagactcaaggacatcgagattgata
gacttagatatcgacgtgaagataatcggatgggatgcgatgatcagaatccaaagcagc
aagaagaaccacccggcggcaaggctgatggcagctttgaaggagttggacctggatgtg
caccacgccagcgtttcggttgtgaacgacttgatgatccaacaagctacggtgaagatg
ggcagtcggttttacaatcaggagcaactcaggctagcgctatcggccaaagttggagat
agccgataa
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