Carya illinoinensis (pecan): 122281478
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Entry
122281478 CDS
T08745
Name
(RefSeq) auxin response factor 2A-like
KO
K14486
auxin response factor
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122281478
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
122281478
NCBI-ProteinID:
XP_042948917
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Position
11:372942..378986
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AA seq
852 aa
AA seq
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MAASDVSINGTSGYSDHNDVRNSTDGEKGHSTFSGTSKDAETALYTELWHACAGPLVTVP
RENERVFYFPQGHIEQVEASTNQVADQQMPLYDLPSKILCRVINVQLKAEADTDEVFAQV
TLIPEANQDENSVEKEPPPPPPPRFYVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLD
MSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKKLVAGDAFLFLRGE
NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTRTMFTVYYKPRTSPAEFI
VPYDQYMESIKNNHSIGMRFKMRFEGEEAPEQRFSGTIVGVEDADTKRWPKSKWRCLKVR
WDETTIIPRPEKVSPWKIEPALAPPALNSLPMPRPKRARSNMVPLSPDSSVLTREGSSKV
TLDPSPSSGFSRVLQGQEFSTLRANFVESNESDTAEKSIVWPPSLDDEKLDVVSASRRYV
SENWMSGGRHEPTYTDLLSGFGANADISHGPCAPYVDQAAAAVKFSRKLSLDQEGKFNFL
ASQWSLRSNLSLNLLDTNLNRPVQVGNVAYQAQGNARYGAIAESSMLHCHRVEQPQGNLL
MPTPAPCHFETPAHSREPMPIPISVQQCEAVKPKDGNYKLFGVSLVSNPVTPVPVAPQRG
MMNEPGGHILDTSHSARTLESDQKSEQSQGSKSADNPLPVNEKKSVQRREQHSREVQGKT
LGSSTRSCTKVHKQGIALGRSVDLTKFNNYEELIAELDQLFEFGGGLMAPQKNWLVVYTD
DEGDMMLVGDDPWQEFCGMVCKIFIYTREEVQKMNPGTLDSKGGDNQLVGEGGNANEVKS
QPLSFTSTPEKC
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcggatgtttctataaatggaacttccggttatagcgaccataacgatgtt
cgaaactcaacggacggggaaaaaggccattccacattttcaggcaccagcaaagacgcc
gagacggcgctttacacggagctctggcacgcgtgtgcgggtccactggtgaccgtgcct
cgtgaaaacgagcgtgtgttctatttccctcagggacatatcgagcaggtggaggcgtct
actaatcaagtggcggaccagcagatgcctttatatgatcttccctctaagatcctttgc
cgggtcattaatgtacaattgaaggctgaagccgacacggatgaggtgttcgcgcaagta
actttgattcccgaggcaaaccaagacgagaactctgtggagaaggaacctcccccacct
cctccaccacgattttatgtgcactctttctgtaagacgctaacggcctcggatacaagc
actcatggtggattttcagtgttaagacgtcatgcagaagaatgtctcccgccactcgac
atgtcaaggcagcctccgacccaggagttggctgccaaggacttgcatggaaatgagtgg
cgattcaggcatatctttcggggccaaccgcgaaggcacttgcttcaaagtggttggagc
gtgtttgttagctctaaaaagcttgttgctggggatgcgtttttatttttaaggggtgag
aatggggagcttcgtgttggtgtgagacgagctatgagacagcagggtaatgtcccatcc
tcagtcatatccagtcacagcatgcatcttggtgtccttgccactgcatggcatgccatc
tctaccaggaccatgttcactgtgtactacaagcctaggacaagtcccgctgaatttatt
gttccctacgatcagtatatggagtctatcaagaataaccactccatcgggatgaggttc
aaaatgcgatttgaaggtgaagaagctcctgagcaaaggttttctggtaccatagttgga
gttgaagatgctgacaccaagaggtggccaaagtccaaatggagatgcctcaaggtgaga
tgggacgaaacaactattatacctcgcccagagaaagtttcgccttggaaaatagagcca
gctcttgctcctcctgcgctaaattcccttccaatgcccagaccaaagagggcccgatca
aacatggtgcccttatcccctgactcctcagttcttaccagggaaggttcatctaaagtg
actctagacccttcgccatcaagtggattttcaagggtcttgcaaggtcaagaattctcg
accttgagagccaattttgtggagagcaatgagtctgacactgctgaaaagtccattgtg
tggccaccttcactagatgatgaaaagcttgacgtagtttctgcgtcgagaagatatgtg
tcagagaactggatgtctggtgggaggcatgaaccaacttacacggatttgctgtcgggc
tttggggctaatgctgatatttcccatggtccctgtgcaccctatgttgatcaagctgct
gcagctgttaagttttcaagaaaactttcacttgaccaggaaggaaagtttaactttctg
gctagccaatggtccttgcgctccaatctctcacttaacttgttagatactaatctgaac
cgtcctgtacaagttggcaatgtagcttatcaagcacaaggcaatgctagatatggtgcc
attgctgagtcctccatgctccattgtcacagagttgagcagccacaaggaaacctgttg
atgcccacaccagccccatgtcattttgagacacctgctcattcaagagagccaatgcct
atacccatatcagtacagcaatgtgaggctgtgaaacccaaagatgggaactacaagctc
tttggcgtatccctcgttagtaatcctgttacaccagtgccagtagcaccacagagggga
atgatgaatgaaccaggtggtcatatacttgatacttcacactcggctcgtactcttgag
tctgatcaaaagtcagaacaatcccagggttcaaaatcagcagataatcctcttcccgtt
aatgagaagaaatctgtacaaagacgtgagcaacattcaagagaggtgcaaggcaagaca
ctaggaagttcaactaggagttgtaccaaggttcacaagcaggggattgcacttggtagg
tcagtggacctaactaaatttaataattatgaagaactgatcgctgaattggaccagttg
tttgagtttggtggtggattgatggctcctcaaaagaattggttggttgtatacactgat
gatgagggtgatatgatgcttgttggggatgatccctggcaagaattttgtggcatggtt
tgcaagattttcatctacaccagagaggaggtccagaagatgaacccaggtacccttgat
tcaaagggcggggataatcaattggttggtgaaggagggaatgcgaatgaagtgaaatcg
cagccgctttctttcacatcaactcctgagaaatgttag
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