Carya illinoinensis (pecan): 122281494
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Entry
122281494 CDS
T08745
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122281494
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122281494
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122281494
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122281494
2.5.1.29 geranylgeranyl diphosphate synthase
122281494
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122281494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
122281494
NCBI-ProteinID:
XP_042948944
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All DBs
Position
11:complement(43327141..43328405)
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AA seq
304 aa
AA seq
DB search
MAVALLHHLLDGNQTLHFLSKSSACRRPFTLRPIRVTMSHNQSYWTSINGEIEAHLKQTI
PLRPPLEVFEPMRHFVLSAPETTAPALCVAACELVGGHRDQSIATASALHLMYTASFVHE
QLPLTDRPRPKSRPMTHHTYNPNIELLIPDAMVPFGFELLAKADDPTQNNSDRILRVIIE
IARAMGSQGMVEGQYHELESSSQWDNEEVSNIAWIEHVCKKKDGGLHACAAMCGAILGGG
GEEEIEKLRRFGLYVGMIRGMSSGIGKKEKGLVRVVEELRNLALKELDEFEGGKFEAISS
FVNA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggctctcctccaccacctcctcgatggcaatcaaactcttcattttctgtca
aaatcaagtgcttgcagacggccattcactctcaggcctataagggtcaccatgtcccat
aaccaatcttattggacctccatcaatggtgagattgaggcccatctcaagcaaaccatt
ccgctacggcctccacttgaagtcttcgagcccatgagacattttgttttatcagcccct
gaaaccactgccccggcactgtgtgttgctgcatgtgagctcgtcggcggccatcgggac
caatccatagcgacggcctccgcactccacctcatgtatacggcctcgtttgttcacgag
caacttccattgacagacaggcctaggcccaagtccaggcccatgacccaccatacttac
aacccaaacatagagcttctcatcccggatgccatggttccttttgggtttgaattatta
gctaaagcagacgacccgacccaaaataactcggaccgtatcttgagggtgatcatcgag
attgcacgtgccatgggttcacaaggaatggttgagggccaataccacgaattggaatcc
tcttctcaatgggacaatgaggaagtaagcaacattgcatggattgagcatgtgtgcaag
aagaaagacggcggattacacgcatgcgccgccatgtgtggggcaatcctaggaggagga
ggtgaggaggaaatagagaagctgaggagatttggtctatatgtggggatgataagaggg
atgtcaagtggtattggaaaaaaagaaaaaggattagtaagagtggttgaagagctaaga
aatttggcactcaaggaattggacgaattcgagggaggaaaattcgaggcaatttctagc
tttgttaatgcttga
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