Carya illinoinensis (pecan): 122281516
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Entry
122281516 CDS
T08745
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122281516
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122281516
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122281516
NCBI-ProteinID:
XP_042948987
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Position
11:complement(39673533..39686198)
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AA seq
399 aa
AA seq
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MQGLIFILLSILLTPSLSSWARVLLSPAAGNTFNVIQYGAVGNGQTDDSQSFLKAWEDAC
GASEGTPTLEIPNGMTFMLSPVAFKGPCKANSVHVLLQGTIVAPSRDAWNGKNEWIQFAE
INGLMIDGGGQIDGQGSSWWQDCNSNCERPTALHINDCQASRLTGIKHLNSAKNHISISG
CSDFYISDLEITAPGESPNTDGIDISHSSAITIEKSIIGTGDDCIAINGGTSNIKITQVT
CGPGHGISIGSLGEDGKYDTVEDVYVGGCTFKGCQNGARIKTWDGGAGYARKITFEDITL
EDSRHPIIIDQFYSSHDGTQGPSKGSSVAVSDVTYRNVHGTSADDEAIIFNCAEESCKNI
VLDQIDITLSDPGKDAQAVCKNAEGTATSTVPSVTCLSN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtctaatattcattcttctttccatcctcttgactccttctcttagttcctgg
gccagggttcttctttctccagctgcaggaaatactttcaatgtgattcagtatggtgct
gttggaaatggccaaactgacgattcacaaagttttctaaaagcatgggaggacgcgtgt
ggagcatctgaaggcaccccaaccctcgaaataccaaacggaatgacattcatgctgagc
cctgttgctttcaaaggcccctgcaaagccaacagcgtccatgttctgcttcaaggaacg
attgttgcaccaagcagagatgcatggaatggcaagaatgagtggattcaattcgcagaa
ataaatggcctaatgatcgatgggggtggacaaattgatggtcagggctcttcttggtgg
caagattgcaactcgaattgcgagcggccaacggctcttcacatcaacgattgtcaggcc
tccaggctaactggaataaagcatctgaatagcgctaaaaaccatataagcattagtggc
tgcagtgacttctacatatctgatctcgaaatcactgcccctggcgaaagcccaaacact
gatggaattgacatctctcactctagcgccattactattgaaaaatccataataggaacc
ggtgatgactgtattgctattaatggcggcacgtctaatatcaaaatcacccaagttact
tgcggtccgggccacgggataagcattggaagccttggagaagatggaaaatacgataca
gtagaagacgtatacgtgggaggctgtactttcaaggggtgtcaaaatggtgcaagaatc
aagacgtgggatggtggagctggatatgcaaggaagatcactttcgaagacatcaccctt
gaagatagccgacaccctatcatcattgaccagttttacagcagtcacgatggtactcaa
ggccccagtaaggggtcgagcgtagcagtgagtgacgtgacttaccgtaatgtgcatggg
acttcagcagatgatgaagccataattttcaattgcgcggaggaaagctgcaaaaacatt
gtattggatcaaatagacataacgttgtctgacccaggaaaggatgctcaggctgtctgc
aagaatgccgaagggacagctacttctactgttccttctgtgacttgcctttcaaattga
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