Carya illinoinensis (pecan): 122281518
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Entry
122281518 CDS
T08745
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122281518
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122281518
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122281518
NCBI-ProteinID:
XP_042948991
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Position
11:complement(39673533..39676129)
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AA seq
399 aa
AA seq
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MQGLIFILLSILLIPSLSSCARVLLSPAAGDTFNVIHYGAVGNGQTDDSQSFLKAWEDVC
GASEGTPTLEIPNGMTFMLSPVAFEGPCKANSVHVLLQGTIVAPSRDAWNGKNEWIQFAE
INGLMIDGGGQIDGQGSSWWQDCKSNCERPTALHINDCHASRLTGIKHLNSAKNHISISG
CSDFYISDLEITAPGESPNTDGIDISRSSAITIEKSIIGTGDDCIAINGGTSNIKITQVT
CGPGHGISVGSLGEDGKYDTVEDVYVGGCTFKGCQNGARIKTWAGGAGYARKITFEDITL
EDSRHPIIIDQFYSSHDGTQGPSKGSNVAVSDVTYRNVHGTSADDEAIIFNCAEESCKNI
VLDQIDITLSVPGKDAQAVCKNAEGTATSTVPSVTCLSN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtctaatattcattcttctttccatccttttgattccttctcttagttcctgt
gctagggttcttctttctccagctgcaggagatactttcaatgtgattcattatggtgct
gttggaaatggccagactgacgattcacaaagttttctaaaagcatgggaggacgtgtgt
ggagcatctgaaggcaccccaacactcgaaataccaaacggaatgacattcatgctgagc
cctgttgctttcgaaggcccctgcaaagccaacagcgtccatgttctgcttcaaggaacg
attgttgcaccaagcagagatgcatggaatggcaagaatgagtggattcaattcgcagaa
ataaatggcctaatgatcgatgggggtggacaaattgatggtcagggttcttcttggtgg
caagattgcaagtcgaattgcgagcggccaacggctcttcacatcaacgattgtcatgcc
tccaggctaactggaataaagcatctgaatagcgctaaaaaccatataagcattagtggc
tgcagtgacttctacatatctgatctcgaaatcactgcccctggcgaaagcccaaacact
gatggaattgacatctctcgctctagcgccattactattgaaaaatccataataggaacc
ggtgatgactgtattgctattaatggcggcacgtctaatatcaaaatcacccaagttact
tgcggtccgggccacggtataagcgttggaagccttggagaagatggaaaatacgataca
gtagaagacgtatacgtgggaggttgtactttcaaggggtgtcaaaatggtgcaagaatc
aagacgtgggctggtggagctggatatgcaaggaagattactttcgaagacatcaccctt
gaagatagccgacaccctatcatcattgaccagttttacagcagtcacgatggtactcaa
ggccccagtaaggggtcgaacgtagcagtgagtgacgtgacttaccgtaatgtgcatggg
acttcagcagatgatgaagccataattttcaattgcgcggaggaaagctgcaaaaacatt
gtattggatcaaatagacataacgttgtctgtcccaggaaaggatgctcaggctgtctgc
aagaatgccgaagggacagctacttctactgttccttctgtgacttgcctttcaaattga
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