Carya illinoinensis (pecan): 122281549
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Entry
122281549 CDS
T08745
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122281549
Membrane trafficking [BR:
cill04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122281549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
122281549
NCBI-ProteinID:
XP_042949064
LinkDB
All DBs
Position
11:12394748..12458028
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AA seq
1829 aa
AA seq
DB search
MLQVRHRRDSTPATTRWQNKFDEKLEQWPHLSELVLCYTTDWVKDENKYGHYDSIGPVSF
QNQIYEGPDTDIETEMRLASARRTKTEDTTDDDIPSTSGRQFAEVTSVISVPKHFGASPL
PAYEPAFDWENERSMTFGQRISEAPISHGLKISVKVQSLSFQVGLVEPFHGTICLYNRER
REKLSEDFHFHVLPTDIQDVNASRGIFYLDAPSASVCLLIQLEKHATEEGGVSSSVYSRK
EPGHLTERDRQKLQVWSQIMPYRESFAWAVVSLFDNGIGVTSGGSASPSSPLAPSVSGSI
SHEGVFEPSAKITLDGKLGYSSGSSVIVEISNLSKVKESYTEDSLQDPKQKAHKPVKGVL
RLEIEKHQNSHTDMENISESGSVTNDSVDLGDRLADSAFRKLPHNGSEGPQSCNSKWNLY
DGREISRNGSNAHENPDLSIDEFHAFDFRTTMRNEPFLQLFHCLYVYPLTVSLGRKRNLF
IQVELREDDVDVGRQPLEAMYPRELGASLQKFVNTQVAVGARVACYHDEIKLSLPAVWTP
SHHLLFSFFHIDLQTKQEAPKPVVVGYASLPLSTHAQLRSEICLPIMRELVPHYLQDVGK
ERLDYLEDGKNIFKLRLRLCSSLYPANERIRDFFLEYDRHTLRTSPPWGSELLEAINSLK
NVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLVN
YVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMA
LEKSRLFYHSLSTDEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLA
FFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLTFLQIICDHDLFVEMPGRDPS
DRNYLSSVLIQELFLTWDHEDLSLRAKAARIIVVLLCKHEFDARYQKPEDKLYIAQLYLP
LVGQILDEMPVFYNLNSVEKREVLIVILQIVRNLDDASLVKAWQQSIARTRLFFKLMEEC
LNLFEHRKPADSMLMGCSSRSPVGDGPASPKYSDRLSPTVNNYLSEASRQEVRPQGTPDN
GYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENLSA
SVSHQVLEITEKFSTMAASHGISTDYGKLDCITAIFMSFFSRNQPLAFWKTLFPVFNSVF
DLHGATLMARENDRFLKQITFHLLRLAVFRNESIRKRAVVGLQILEKSSFYYFMQTARLR
VMLIITLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMADESKSSNLLRDCGLPESA
LATIPERSAENKWSWSEVKYLSDSLLLALDASLEHALLGSVMSMDRYAAAESFYKLAMAF
APVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARNDGVWSKDHVTALRK
ICPMVSSEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVIP
VYKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFYGERFGKLDKKEYVY
REPRDVRLGDIMEKLSHIYESRMDGNETLHIIPDSRQVKADELQPGVCYLQITAVDPVME
DEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRSVLQTQGSFP
ALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQG
SVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEED
QDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggttcgacaccggcgggactcgaccccggccaccacgaggtggcagaacaag
tttgatgagaagttggagcagtggccgcatctcagcgagctggtgctatgctacaccact
gactgggttaaggatgaaaacaagtacggccactacgacagcatcggcccggtgtcgttt
cagaaccagatatatgagggccccgatactgacatcgagactgaaatgcgacttgccagt
gcaaggcgaaccaagactgaagatactactgatgatgacattccaagtacctcaggaagg
caatttgcagaggtgacctctgtcatatctgtccctaagcattttggtgcatcccccctc
cctgcttatgaaccagcatttgattgggaaaatgagaggtcaatgacatttggtcaaagg
atttcagaagctcctatatcacatggattgaagatatctgttaaagttcagtcgttatca
tttcaagtgggattagtagagccgtttcatggtacaatttgcttatataatagggagaga
agagaaaagttgtcagaggatttccattttcatgttttacctactgatatacaggatgtt
aatgcatcacgaggaatcttctatttagatgctccatcagcatctgtttgtctgctaatc
cagttagaaaagcatgcaacagaggagggtggggtttcttcttctgtttattcgcgtaaa
gaaccgggacacttgactgagagagataggcagaagctgcaggtgtggtctcaaatcatg
ccttacagagaatcctttgcctgggctgttgtttcattattcgataacggcattggtgta
acttctggtgggtctgcttccccaagcagccctcttgctcccagtgtgtctggttcaatt
tcacatgagggtgtgtttgagcccagtgcaaagatcacattagatgggaagctgggttat
tcaagtggaagctctgttatagttgaaatatcaaacttgagtaaagttaaggaaagctat
actgaggactcacttcaggatccaaaacagaaggctcataaacctgtgaagggtgttttg
agactagaaatcgagaagcaccagaatagccatactgacatggaaaatatatcagaaagt
gggagtgtgaccaatgactctgttgacctgggggatcgtcttgctgattctgcatttcga
aagctcccccataatggttctgaaggacctcagagttgcaactcgaagtggaatttatat
gatgggagagaaatatctagaaatggatcaaatgcccatgaaaaccctgatctcagcatt
gatgagttccacgcttttgacttccgcactacaatgagaaacgagcctttcctgcagctc
tttcattgtctgtatgtatatcccttgacagttagtttaggtcggaagagaaatttgttc
atacaggttgaactaagagaggatgatgttgatgttggtagacagcctttagaggcaatg
tatccgagggagctaggcgcatcactacagaagtttgttaacacacaagttgctgttggg
gctagggtggcctgttaccatgatgagattaaactttccctccctgccgtctggactcca
tcacaccaccttttattctcttttttccatatcgatcttcagacaaaacaagaagctcca
aaaccggtggttgttggatatgcatcacttccattatctacacatgctcagttgcgatct
gaaatttgtttgccaatcatgagagagttggttccacattatcttcaggatgtggggaag
gagaggctggattatttggaagatggtaaaaacatctttaaactgcgcttaagactatgt
tcgtcattatatcctgccaatgagcgtattcgagacttctttcttgaatacgacagacac
actctgcgaacaagcccgccttggggttctgaacttctggaggccattaacagtttgaag
aatgttgattccacagctttgcttcagtttcttcacccaattttgaatatgcttcttcat
ctgataggcaatggtggagaaactctccaggttgcagccttcagagccatggttaatatt
gtcactcgggtacagcaggagtcagttgatgatgctgaaagaaatcattttctagtaaac
tatgttgattatgcttttgatgactttggaggtcgtcaaccaccagtatatcccggtttg
tccactgtctggggaagcttggcacgaagtaaggctaaaggctaccgtgtcggaccagta
tatgatgatgttttggcaatggcttggttttttcttgagttgattgtcaagtcaatggca
ttggagaagagtcgtctgttctatcatagtctttccactgatgaagatatcccgccaatg
caattgaaagaaggtgtttttagatgtatcatgcagttgtatgattgccttcttacagaa
gtgcatgagcgttgtaaaaagggtttgagcttagcaaaacgtttaaatagcagcttggcc
ttcttttgttatgatcttttgtccatcattgaacctcgccaagtgtttgaattggtatca
ttgtacctggacaagttttctggggtgtgtcaatcagtactccacgattgcaagcttaca
tttttgcaaattatatgtgatcatgacctttttgtggaaatgcctgggagagacccttca
gatcggaactacctttcatctgtcttgatacaggagctattccttacttgggatcatgag
gatttatctctgcgggcaaaggcggctagaatcatagtagtcctcctgtgcaagcatgag
tttgatgctcgataccaaaaacctgaagataaactatatattgcccagctatatcttcca
cttgttggacagatcctagatgaaatgcctgtcttttacaacctaaattctgtggaaaag
cgtgaagttttgattgttattttgcaaattgtacggaatcttgatgatgcatcacttgtc
aaagcatggcagcaaagcatcgctcggactagattattttttaaactcatggaggaatgc
ttaaatctttttgagcatagaaaacctgctgacagcatgcttatgggctgtagttctcgc
agccctgttggggatggacctgcttcccccaagtactcagatagactttctcctacagtt
aacaactatctgtccgaggcatcaagacaagaagtcagacctcagggaacacctgacaat
ggttatttatggcagagagtgaactcccaattaagctcccctagccagccatattcattg
agagaagctcttgctcaggcacagtcttctaggattggagcttctgcacaagcactcaga
gaatctttgcacccaatattgagacaaaaattggaactttgggaagaaaacttgagtgct
tctgtcagtcatcaggttttggaaataacagagaaattttccacaatggcagcatcccat
ggaatctctactgactatggaaaacttgattgcattacagctatattcatgagctttttc
tcccgaaatcaacctctcgctttctggaaaactttgtttcctgtctttaacagtgtgttt
gatcttcatggcgcaactctaatggcgagggagaatgatcgcttcttaaagcaaataact
ttccatttacttcgacttgcagtttttcgaaatgaaagcattagaaaaagggctgttgtt
ggacttcagatacttgagaagagttctttttattacttcatgcagacagcaagattaagg
gtcatgctgattatcactttatcagagcttatgtctgatgtgcaagtgactcagatgaag
tctgatggaacgctagaagagagtggtgaagcacgtcgtcttagaaaatctttggaagaa
atggcagatgaatctaaaagctccaacctattgagggactgtggactaccggagagtgct
cttgctacaattccagaaagatcagcagagaacaagtggtcctggtcagaggtgaaatat
ctctctgacagtcttcttctggccctggatgctagcttggagcatgcacttttggggtct
gtcatgagcatggatagatatgctgctgcagagagtttctacaaacttgcaatggcgttt
gcgccagttccagatcttcacattatgtggttgctgcatttatgtgatgcacatcaggaa
atgcagtcttgggctgaagctgcccagtgtgctgtggctgttgctggtgttgtaatgcag
gcccttgtagctagaaatgatggtgtttggagcaaggatcatgtgacggcccttcggaaa
atttgcccaatggtaagcagcgagatcacatctgaagcatctgcagcagaggtagaggga
tatggtgcttcaaaactcacagttgactctgcagtgaagtacctacagctagctaataag
cttttctctcaagctgagctctatcatttctgtgccagcattctcgaacttgtaattcca
gtttataaaagcaggagggcatatggacagctggctaaatgtcacacattactcactaat
atctatgaatcgatccttgagcaggagtcaagcccaattccatttactgatgcaacatac
tatcgggtgggattctatggtgaaagatttgggaagcttgataaaaaggagtatgtatac
cgagagccccgtgatgttaggcttggtgacataatggagaaacttagtcatatatacgag
tccaggatggatggcaatgaaactttacacattattccagattctagacaagtgaaggca
gatgagttacagcctggagtctgctacttgcagataactgccgttgatccagtaatggaa
gatgaggacttgggaagcagaagggagaggatcttttctctctccaccggaagcgtccgt
gcacgagtctttgaccgctttttgtttgataccccattcacaaagaatggcaagacccag
ggtggattggaagaccaatggaaaaggcgaagtgtgcttcagactcagggctccttccct
gcacttgtgaataggctactggtgattaaatctgaatctctcgagttttctccagtagag
aatgcaattggaatgattgaaacccggacagctgcactacgaaatgagcttgaagagcct
cgcagttctgaaggggatcaacttccacgtctccagagtttacaaagaatccttcaaggc
agtgttgctgttcaggtgaacagcggagtcctgagtgtgtgcacggccttcctttctggt
gaacctgctactaggttgcgttcacaggaactgcagcaactcattgctgcactgcttgaa
tttatggctgtctgcaagcgtgcgattcgggtgcacttcagattgattggagaggaagat
caggatttccacacacagcttgtgaatgggtttcagtccctcactgcagaattatctcac
tacattcctgccattctgtcagagctgtga
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