KEGG   Carya illinoinensis (pecan): 122281558
Entry
122281558         CDS       T08745                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    122281558
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:cill01001]
    122281558
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cill03032]
    122281558
   03036 Chromosome and associated proteins [BR:cill03036]
    122281558
   03400 DNA repair and recombination proteins [BR:cill03400]
    122281558
Enzymes [BR:cill01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     122281558
Protein kinases [BR:cill01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   122281558
DNA replication proteins [BR:cill03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    122281558
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    122281558
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122281558
SSDB
Motif
Pfam: PI3_PI4_kinase FATC FAT TAN AAA_lid_PRS2_C
Other DBs
NCBI-GeneID: 122281558
NCBI-ProteinID: XP_042949079
LinkDB
Position
11:4426675..4522099
AA seq 3038 aa
MVTSRDVQEIVSKLSSDKAKAREEGIRLLNTWLDGERSVAFCKFLGQNSARLRPDEIPHS
ETWPFLVTLLIQCASLEISSSKRRLPKLIYAKTLRIVVQRAEDAKFSGKMLTLLSAIKLL
FNHIWDVLSNAPSFQSEYSIILRHLLAIRDYRFHMRRRIYCSLVLLYMEKLEASFSGKDN
EYNPKEEVFRCVLTLHSLLENPPGDFPDNIREDIVKGFVRIFSFIRDEGKISRKLIECIN
MFLLKDGPNLGCQSLEIHNAVQQFVFRCWLTTHDRTLKDALILYARLQLNLTRGGADGNS
LVQQLLDVVWKDLDQSNISSTGVPWSDSTKDDKLGTLSSSQCRLVELAAVVFYRACVDTS
KAPSSQKRIKREHVSVHLREALAKGKWLWNAAFCCLIRNYHTCICKDLFVYWFEGLCSSF
ERILNDANMGHAYDGLLWTLRSLQELSSLLLVPDLKGETLSRSSSTLNEFDSSWQVIWSC
LMHGLPIFSNVTAVADVTLVLLGNIISYDLINTYVVPQDVWDLRLFKQMPSVSLLYFISC
YFSRKGSQGDIRDISHLRKSLLRAVLGHINWKESSVLNERIVLFLPAAVYALCAGSSPFT
QCYKGLLPSYSFVDDAEAMVVDLVKTEDIEHRSQHELFECSIEVLARIDDDSGVEVYPSQ
SIQSVRLPRQLRDQLLQEMETYILESFVDKEIEDRTMSDILLRCSLFSNLIYGSYLTRKS
KEVSQFMSKMGKYLLELLDCALIFIQENHNDFQSLGSLGSDSIFGGTNSLAASLQCFICC
PIFSKMREQKNLEVFLYDSLVQSMERLLKALVKVYEEHSICVRKFQSDVSLQELSASDNL
DFLPSDSNKSRIMDMELDVNENSSDVDILTVGGKIATSMSFSSEKWKLGMISLISSFFPV
LQVVTWDVLFELMGKESDRKVCEKILYNLCQHPYWPSSAKVTDLVNFINDMIKMQVSLKV
DCVNILASIHGLLSSLLSLDTVRKDKYARLSLEEVDSEQRLAHLGDLVNKVSVLDLLDWF
GRVRLIDCICDFVLLHPQIGQMMIERLLVLLRDPDYRVRFFLARRLGVLFQTWDGHEELF
QDICSNFGVALVLSSKEKLVTAQEVLAAGPQPRPLMETVIITLMHLALYSEEVELEAVFM
ISVVAAIDPCQRELVYAVLHNLSRQLKYTSILKYMEELMGSIIFCWVACGVSLSALVEVR
QLFVSDAEPSYFIQYFCHWLLPALVVHGDRSNLCWVAKVASQPLAVLVKSQFVPIFAVCM
ALHCSKRSGWEKGAVVLQSSILHLAEISENERDKLIKKYMVSIVSYILSLASCASDPPVP
FFSRDTIAHAIQTVVDGFLEMEDNPITVSVVDKINIFRPDRVFMFIVEMHYKIAAAVHHR
HKCHRLAGIEVLINILGHRAAVSSSSTYLFNLVGQFIGCHALQDQCCCIISTLLSTFRSN
PSKEIVSVLGEQLQFLVSKLVACCIPSEANGERSGSRSSQVLSLLLHLTVDSDPALYDYI
RELEPFPEIDIFEGIRKFHQELCHAYSPRDHLLKFVKRSFYLPPRLLLWSLQALHKKLLM
DETFRIGMNAEDLVTNGYWDGDHEIVPAVWTLVRLCGSDDADSVRALVSDFISRIGIGDP
HCVVFHFPGESSHMHVCRPINHDSATELNFHMVTGISEELLIAVLRLLKKYLMDDSVKIV
DMTSQALRGILSTESGQRALMSFDSYEKSLIEVHSKGIDIKLVEKFILDLERKFKAEAIS
LEKSTLWVTDSKTFEVWICQLVYSLIGYCNDVILRLCQEIVLLKSEVAELLLPSVVVNLA
GRKDMDVDLHKIISSQLQEHIFTGSNKLIKSIQVFLNVFNELRLCHVMEKSSSLQMKRES
SKCAKASSYISKSCSTSMKARDSVSMSSAEMTPTALWDKVYWLCIDYLVVAKSAVLCGSY
FTSMMYVEHWCEEHFSNLTLGSPDFSHIEVLPLHIGILLSAVTQINEPDSLYGIIQSHKL
LSQIITFEHKGNWSKALEYYDLQVRSDASVKMDGGARYLSPKQIQPADHLSGFRLEDEMT
NRNPYKGLIRSLQQVGCMHVLDLYCQGLTSRNGQFQHDQEFTELQYEAAWRAGNWDFSLV
YGGTNSPSSSQQIKSDHFNENLHSCLRALQEGDFDEFHTKLKDAKQELVLSVSRASEEST
EYIYSTIIKLQIFYHLGIAWDLRWTTSPYERIKYYPEKKKVFSEPIIPTSERLSWLNKNW
DSILERTQLHMNLLEPFIAFRRVLLQILSCKDCTMKHLLQSASTLRKGCRFSQAAAALHE
FKFLCVETGEQCSTLYWIGRLEEAKLLRAQGQDEMAISLAKYIIQNYKSAEEAADVYRLV
GKWLAETRSSNSRTILEKYLKPAVSLAEDQKTTNKKSMERQSLAHFHLAHYAGALFRSYE
ERLNSNEWQAAMRLRKHKTIELEALIRRLNSSSRGEKIDYSYKIQDLQKQLTMDKEEAEK
MQDDRDNFLSLSLEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVVNSMLSTIDEVQS
YKFIPLVYQIASRMGSSKDHSGPCNFQFALVSLVKKMAIDHPYHAIFQLLALANGDRIKD
KQRSRNSFVVDLDKKNAAEKLLQELSAYHGTIIRQMKQMVEIYIKLAELETRREDTNKRM
TLPREIRSLRQLELVPVVTATFPVDRSCQYHEGSFPYFKGLADSVMVMNGINAPKVVECL
GSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLQNHRDTWKRRLGVRTYKVVPFTPSA
GVLEWVDGTLPLGEYLTGSTRNGGAHGRYGIGDWRFLKCREHMTNEKDKRKAFQEVCEKF
RPAMHYFFLERFLQPAVWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQASAEVVH
IDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGVFRRCCEETLSVMRTNKEALLT
IVEVFIHDPLYKWALSPLKALQRQKEMDDDLETIFEGSHDEYEGNEDATRALMRVKQKLD
GYEDGEMRSVHGQVQQLIQDAIDPERLCHMFPGWAAWM
NT seq 9117 nt   +upstreamnt  +downstreamnt
atggtcacttcgagggatgttcaagaaattgtttcgaagctctcatccgataaagcaaaa
gctcgcgaagaagggataaggttgttgaatacgtggttggatggagaaagatcagttgcc
ttttgtaaatttcttggtcagaactctgcaaggctaagacctgatgaaattcctcattct
gaaacatggccttttctcgttactttgctgattcaatgtgcatccttggaaatatcctca
agcaagcgacggttgccaaaattgatatatgcaaagactcttcgaattgttgtgcaacga
gctgaagatgctaaattttcgggcaaaatgttgactttgttatctgctatcaaattgctt
ttcaatcacatatgggatgttttaagcaatgctccaagctttcagtcggagtattcaata
attctccggcatcttttggcaattagagattatcgttttcacatgagaaggcgcatatat
tgcagcttggtgcttctttacatggagaagttggaagcaagctttagtgggaaagacaat
gaatataatcccaaagaggaggtgtttcgatgcgtccttactctccattcacttctggaa
aatcctcctggagatttccctgataatattagggaagatattgttaaggggtttgttagg
attttctctttcataagggacgagggaaagatttcacgcaagcttattgaatgtataaat
atgttcttgttaaaggatggcccaaacttgggctgccagtcattggaaattcataatgcc
gttcagcaatttgtgttccgttgttggttaacgacccatgatcgaacacttaaggatgca
cttattctctacgcaaggttacaactaaatttaactagaggtggtgctgatgggaattct
ttggtacaacaacttttggacgtagtttggaaggacctagatcaaagcaatatatccagc
actggcgtgccttggagtgattcaactaaagatgataagcttgggactctaagtagttca
cagtgtcgtttagtggaacttgcagctgttgtattttatcgggcatgtgttgacacaagc
aaagcaccatcgtctcaaaaacggatcaagagggagcatgtttctgtccatctaagagaa
gctcttgctaaagggaaatggctatggaatgctgcattctgttgtctcattcgcaactac
cacacctgcatttgtaaagatctttttgtctactggttcgagggcttatgttcaagcttt
gaaagaattttgaatgatgcaaacatgggtcatgcttatgatggtttgctgtggactctg
cggagtttgcaggaactctcttctctattgctggttccagatttgaagggggagacttta
tcaaggtcatcttctactttgaatgagtttgactctagttggcaagtaatatggagctgt
ctaatgcatgggttgccaattttcagtaatgtaaccgcagttgctgatgttactttggtg
cttcttggtaacataatctcatatgatctaataaatacatatgttgtacctcaagatgta
tgggatcttaggttattcaaacaaatgccatctgtgtctcttttgtatttcatttcttgt
tacttctcaaggaaaggttcccaaggtgacattcgtgacatttcacacctcaggaaaagt
cttttgagagctgttttgggtcatattaattggaaggagtcttctgtattaaatgagcgg
atagtattattcttgccagcagcagtctatgctctttgtgctggttcttctccttttaca
caatgctacaaagggcttttaccatcttactcttttgtggatgacgctgaagccatggta
gtagatctggtgaagacagaagacattgagcatcgtagtcagcatgaactgtttgagtgc
tctattgaagttctcgcgagaattgatgacgactctggtgttgaggtttacccatctcaa
agcattcagagtgtacgtcttccacgacagttgagggatcagctgctgcaggaaatggag
acttatattcttgaatcttttgtagacaaggaaattgaagataggacgatgtcagatatt
ttacttagatgttcactattctcaaacttgatttatggatcatatctgacaaggaaaagc
aaagaagtttcacaatttatgtccaaaatgggcaagtacttgttagagctactggattgt
gctcttatcttcattcaagaaaatcacaatgattttcaatctctcggttccttagggtct
gactccatttttggtggaacaaactctcttgctgcatcattacaatgtttcatttgctgt
ccaattttctcgaaaatgagggaacaaaaaaatctggaagttttcctttatgattcatta
gtccaatccatggaaaggctgttaaaagctctggtgaaagtttatgaagagcattctata
tgtgtaagaaaattccaatctgatgttagcttgcaagaattatctgcatctgataatttg
gattttctcccatctgatagcaacaaaagtaggattatggacatggagttggatgtgaat
gagaattccagtgatgtggatattttaactgttggtgggaaaattgccaccagcatgtcc
ttttcttcagagaagtggaagttgggcatgatatcactcatttcaagttttttcccagtt
ttacaagttgttacatgggatgtcctatttgaactcatgggcaaagaatctgatcggaag
gtgtgcgaaaaaattctatacaatctatgtcaacacccctactggccttcttctgcaaag
gttactgatttggtgaattttattaatgacatgattaagatgcaagttagtcttaaggtc
gactgtgttaatatacttgcttcaattcatgggttgctatcttctttattatccttggac
actgtcagaaaagataaatatgctcgtctatctctggaggaggtggattctgaacagaga
ttggcacatctcggagatctggtgaacaaagtctctgtcttagatcttcttgactggttt
ggtcgtgttaggctgattgattgcatctgcgactttgttttacttcatcctcagattggt
cagatgatgattgaaaggttgcttgtgttgcttcgagaccccgattatcgagttagattc
ttcctcgctaggcggttgggtgttctttttcaaacatgggatggtcatgaagagctattc
caggatatttgttccaattttggggttgcattggtgctttcctcaaaagaaaaacttgtt
actgcacaggaagtcctagctgctggtcctcagcctcgtcccttaatggagactgttatt
attactcttatgcatcttgctttgtatagtgaggaagtggagttggaggctgtatttatg
atcagtgtggttgctgctattgatccttgtcagagggaattggtctatgcagtacttcat
aatctatctcggcagctcaagtatacatctatattaaagtacatggaagaactcatggga
tcgataatcttttgctgggttgcttgtggtgtaagtttatctgcacttgtggaggtacgt
caactttttgtttcagatgccgaacctagttatttcatccagtatttttgccattggctt
cttccagctctggttgtacacggagataggtccaacctatgctgggttgcaaaggttgct
tctcaaccattggcagttctggttaaaagccagtttgtgccaatcttcgctgtttgtatg
gcattgcattgcagtaagagatctggttgggaaaagggagcagttgttcttcagagttcg
attttgcatcttgctgagatatctgagaatgaacgtgacaaactcataaagaaatatatg
gtatcaattgtcagctacattctgtctcttgcctcttgtgcatcagatcctccagtccct
ttcttttccagggatacaatagcacatgcgattcaaacagttgttgatggttttttggaa
atggaggacaatcctataactgttagtgttgttgacaagattaacatttttaggccagat
agagttttcatgtttatagtggaaatgcattataaaatagcagcagcagttcatcatagg
cataaatgccatcggttggctggaattgaggtgcttataaatattcttgggcacagagct
gctgtttcaagctcttccacttatcttttcaacttggttggacaattcattggttgccat
gctttacaagaccaatgttgttgcatcatctccacattgctaagtacttttagaagtaat
ccatccaaagaaattgtcagtgtgctcggtgaacaacttcagtttctggtgtcaaagttg
gtggcatgttgcattccatctgaagctaatggagaacgttcaggcagtagatcatctcaa
gttttgtcgttgcttctccatctaactgtggactccgatccggctctttatgattatatc
agagaattggaaccctttcctgagatagatatatttgagggaataagaaagttccatcag
gaattgtgccacgcctactctcctagagaccacttattgaagtttgtgaagagatctttc
taccttccaccaaggttacttttgtggagtctccaggcactgcacaagaagttactcatg
gacgaaacttttcggataggaatgaatgcagaagatctcgtgacaaatggatattgggat
ggtgaccatgagattgtgcctgcagtctggacacttgtccgtttatgtggttcggatgat
gctgatagtgttagagcattggtgtctgatttcatttctaggattggaattggggaccca
cattgtgttgttttccattttcctggagagtctagtcacatgcatgtttgccggcctatt
aatcatgactctgctacagaactcaattttcacatggttactggcatatctgaagaacta
ttgattgcagttttgagacttctgaaaaagtacctgatggatgattctgttaagatagtt
gatatgacttcacaagctcttcggggaatactttcaactgaaagtggtcaaagggctttg
atgtcatttgattcttatgagaagtctcttattgaggttcactccaagggcattgatatc
aagctagtggaaaagttcattttggatctggaaaggaagttcaaagctgaagcaatttct
ttggagaaatccacattatgggtaacggatagtaaaacttttgaggtgtggatttgtcag
cttgtatactcgcttattggctattgcaatgatgtgattctgagattatgtcaagaaatc
gtgttgctgaaatctgaagttgctgagcttctgttgccaagtgttgttgtcaatctggct
ggcaggaaagatatggatgttgatcttcacaaaattatctcatcacagctacaggaacat
atattcacagggtctaacaagttgatcaaatcaattcaagtcttcttaaacgtctttaat
gaactacgtttatgtcacgttatggaaaagtcttcttctctacaaatgaagagagaaagc
tctaagtgtgcaaaggcttcaagttatatctcaaaatcctgttccacatccatgaaggct
agagattcagtttctatgtcaagtgctgagatgacaccaactgctttatgggacaaggtt
tattggctttgcattgattaccttgttgttgctaaatcagcagttctatgtggttcatat
tttacatctatgatgtatgttgagcattggtgtgaagagcatttcagcaacctcacacta
gggagcccagatttctcccatattgaagtgttaccacttcacattggaatacttctctct
gctgtcactcaaatcaatgaacctgacagcttatatgggatcatccagtcgcacaagttg
ctgtctcaaatcattacctttgagcacaaggggaactggagcaaggctcttgaatattat
gacttgcaagtacgatcagatgcctcagtgaaaatggatggtggtgccagatatttgtca
ccgaaacagattcaaccagcagatcatctctcagggttcagattggaagacgagatgaca
aatagaaacccttacaaagggttgattagatctttgcagcaagttgggtgtatgcatgtg
ctggatctgtattgccaaggcttgacttctcggaatggtcagtttcagcatgatcaggaa
ttcactgaactgcagtatgaggctgcttggcgtgcaggaaactgggatttctccttagtt
tatggtggaactaattctccatcttcaagtcagcaaatcaaaagtgaccatttcaatgaa
aacttgcacagttgcttgagggcattgcaggagggagattttgatgaattccatacaaaa
ctgaaagatgcaaagcaggagcttgtgctgtctgtttcccgtgcgagtgaagagagcacc
gaatatatctactcaacaataatcaagctccagattttttatcatcttggcatagcttgg
gatttacgttggacaacatctccatatgagagaataaaatactacccagagaagaagaaa
gtattttctgaacctataattccaacctcagagcggttgtcgtggttgaataagaattgg
gactccattttagaaagaacacagctacatatgaatctgttggaaccatttatagcattc
aggcgagtcctgcttcaaatcttaagctgtaaagactgtacgatgaagcatcttttgcag
tctgcgtccactcttcgtaagggctgtaggttttctcaggcagctgcggctttgcatgag
tttaagttcctctgtgttgaaactggagagcaatgctcaactttgtattggattggaagg
cttgaagaagcgaagcttttgcgtgcccaaggtcaggatgagatggctatcagccttgca
aaatatatcatacagaactacaagtcggctgaagaggctgcagatgtatatcgcttggtt
ggaaagtggctggcagaaactcgatctagcaactcaagaactattttggagaagtatttg
aaacctgctgtgtcacttgctgaagatcagaagactacaaataaaaagtccatggaaaga
caaagcctagctcattttcacctcgcacattatgcaggtgctctatttcggagttatgag
gaaaggcttaactctaatgagtggcaagcagcaatgcgtttaagaaaacacaagacaata
gagttggaagcacttattagacgtttaaacagttcatcaaggggggagaagattgattac
tcatataaaatacaagatctgcaaaagcaacttacaatggacaaggaagaggctgaaaaa
atgcaggatgatagagacaattttctcagcctgtcattggagggatataagcgttgcttg
gttataggggacaaatatgatgtgagagtggtatttcgactagtttccttgtggtttagt
ctttcttctagacagaacgttgtaaatagcatgcttagcacaattgatgaggttcaatct
tacaaatttatacctctagtgtatcaaattgcatcaagaatgggtagctcaaaggaccat
tcagggccttgtaattttcagtttgctttggtttctctggtgaagaaaatggcaattgac
catccataccatgcaatctttcagcttctagctcttgccaatggtgaccgaatcaaggac
aaacagcgtagccggaactcatttgttgttgatttggataaaaaaaatgcagcagagaaa
ctattacaagagttatcagcatatcatggaactattatacgacaaatgaaacaaatggtg
gagatctatattaaacttgcagaactagaaacgaggagagaggacaccaataaaaggatg
acactaccaagagaaatacgtagtcttcgacagctggaacttgtacctgtagtgacggct
acctttccagttgaccgtagctgtcagtaccacgaaggctcttttccatacttcaaaggt
ttagcagattctgttatggtaatgaatggcattaatgctccaaaagtggttgaatgcctg
ggttctgatggtcacaaatatcgacagctggcaaaatctggaaatgatgatctaagacaa
gatgctgttatggagcaattttttggtttagttaacacctttttgcagaaccatcgcgat
acctggaaaagaagattaggagtacgcacatacaaggttgttccttttactccaagtgct
ggtgttctagaatgggttgatggcacccttcctcttggggaatatcttactgggagcaca
agaaatggaggtgctcatggtcggtatggaataggtgactggcgatttctcaagtgccga
gagcacatgacaaatgagaaagacaagcgcaaagcatttcaagaagtttgtgagaaattc
aggcctgccatgcattacttttttttggagagatttttacaaccagctgtctggtttgag
aagagacttgcttatacacggagtgtggctgctagttccatggttggttacattgttggc
cttggagatcgacatgccatgaatattttaattgatcaagccagtgctgaagttgttcat
atagatcttggcgttgcctttgagcaagggttgatgcttaagacaccagagagggttcca
ttcaggcttacaagagacatcattgatggcatgggtgtcactggagtggaaggggttttc
agaagatgctgtgaggaaactctttctgttatgcggacaaataaagaagcattactgaca
attgttgaggtttttatacatgatcccctatacaagtgggcattatctcctctgaaggcc
ttgcagcgtcaaaaggaaatggatgacgatctggagacaatctttgaaggctcacacgat
gagtatgaaggtaacgaggatgccacacgtgcactgatgcgtgtcaaacaaaaactagat
ggatatgaagatggtgaaatgcgcagtgtacatgggcaggtgcaacaactgatacaggat
gctattgatccggagcgtttgtgtcatatgtttcctggatgggctgcttggatgtga

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