Carya illinoinensis (pecan): 122281560
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Entry
122281560 CDS
T08745
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122281560
Membrane trafficking [BR:
cill04131
]
Protein recycling
Others
Retriever complex
122281560
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Gene cluster
GFIT
Motif
Pfam:
Ldi
Motif
Other DBs
NCBI-GeneID:
122281560
NCBI-ProteinID:
XP_042949087
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Position
11:complement(43484129..43500658)
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AA seq
920 aa
AA seq
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MEFKPRNYNAQREAHALPLVRTDGHPLSAPPSHHPQVDAVDNDHNDFFDPLRGLADNATD
CKEDVQELESTSREASSQLPTKEWMSFKRFLMQKFPVSKMVSISSMSNVIMKGVKVAEKS
LTSTHLEELEDPEKCAEDGVKVVTRQEYISRLHELKDEINRAWHANDRVTSLKLAIKVAR
LLMDTSVLHFYPTLFVLSMDIMDMLGDMVWERIKWKAEFAEDGTRLFSLPENFQARDICS
DAKETCNNWFCKIGSICELLPRIYLELALLPCWRFLVDQPEDSLHRLVMMTRGLSDPLAS
AYCRLYMAHCAQKLPRSDTGYLVKCVNDINIQLMRIISAREMTHRNSTDNKRLLFSLMEP
TIEYIMKSIFKDASKSQVSNVLVELGSRRNQVELFGSLQCISMVLHHLLKELPAEVVTSN
AMEILHIIECSNDYSFDQCLNYRLLGFRLSERRSQMDIIHDVVDKVIQVLSQNSSLDEYL
KIVDAYVDIVLQNQMLCQDNHLNTILGGILNRACNKAVAEDELESLQTILMKLLNHFKGL
EDVFALNHFLEILDIMHGSSRSFVNMHILNLATRNSSISDPTTIQLLFEISQALHDDLDF
LNAKGDDNQPARLISRFVHMVDYSSELERHLTFLVECRGAFGNLNELKETLVHSSNCLAI
KALKDAKKHLSFVKSCIAFGEVTLPSISAQIKQLNLYLETAEVALVCGLVSHSDGLIDSA
ISCLLSLDCVDGSRTTDIEGILSAIQKLFCLLIMVPGNPEQGVTYFANNILALVNSSSWM
TPAMRTRIFCTTLTLTATLSQNKLPYHAVHGEIFGNDLLFFGDSSYLHELVLLSESVLQN
VVDSIQKEPSPAGRGCIALEACNCIASSFVVSPEISQICSKLIETAKSCLSANDKYLQST
IKFLDKNLRAPVVAVSSVAV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaacctcgcaattacaatgcccaaagggaagcacacgcgctccctcttgta
cgtaccgatggccatcccctctccgctccaccctcacaccaccctcaggttgatgctgtg
gataatgatcataatgacttttttgatccgctgagaggattggctgacaatgcaacggat
tgtaaagaggatgtacaagaacttgaaagtacttctcgtgaagcatcttctcaactcccc
acgaaagaatggatgtctttcaagagatttttaatgcagaaatttcctgtctccaagatg
gtttcaatttcttcaatgtccaatgtgataatgaaaggtgtaaaggtggctgagaaatct
ttgacgagtacgcatctggaggaactagaagatccagagaaatgcgcagaagatggtgtc
aaggtcgtcactaggcaggagtatatctctcgactacatgagctcaaagatgaaattaat
cgtgcttggcatgccaatgatcgtgtgacatctttaaaattagctataaaggttgctagg
cttttgatggatacgtctgttttacatttttatcctacgctctttgttctttctatggat
ataatggacatgctaggggatatggtatgggagcgcatcaagtggaaagcggaatttgct
gaagatggaaccagactcttctctttaccagagaactttcaagcaagagacatttgctct
gatgccaaggaaacttgcaataattggttctgcaagattggttccatctgtgagcttctt
ccacgcatctacttagagctggctttattgccctgctggcgcttcctggttgaccaacct
gaagacagtctccaccgtttggttatgatgacgagagggttatcagatccattggcatct
gcttactgtcgtctttatatggctcactgtgcccagaagttgcccagatctgatacagga
tatctggttaaatgtgttaatgatatcaatattcagttgatgcggattatatcagccagg
gaaatgacacatagaaattctacagacaacaagagattgcttttttctttgatggaacca
accattgaatatatcatgaaaagcatatttaaggatgcatctaagagtcaagtcagtaat
gtacttgtggagcttggatcaagaaggaatcaagtggagttgtttgggagtttgcaatgt
atctcaatggttcttcatcatctactcaaggaacttcctgctgaagttgttacttcaaat
gccatggagatccttcatatcattgaatgcagcaatgattattcatttgatcagtgcttg
aattacaggttgcttggattcaggctgtctgaaaggagatctcaaatggacattatccat
gatgtggttgataaagttattcaggttctcagtcaaaacagcagccttgatgagtacctg
aagattgtggatgcttacgtggatattgttcttcaaaatcagatgttatgccaggataac
catctgaacaccattttaggaggtattttaaaccgagcatgcaataaagcagttgctgaa
gatgaattggaaagcttgcaaaccatcttgatgaagcttcttaatcatttcaagggcttg
gaagatgtattcgctttgaaccattttctggagattttagatataatgcatgggagttca
cggagctttgtcaatatgcatatacttaacctggcgacaaggaacagttctattagtgat
ccaacaaccatacagttgctttttgaaatttctcaggctcttcatgatgatcttgatttt
ttgaatgcaaaaggtgatgataaccaaccggcacgtttgatttcccgttttgtgcatatg
gttgactatagctcagagttggaacgccatttaacctttttagttgaatgtcgcggagct
tttggtaacttaaacgaacttaaggaaactcttgttcactccagcaattgtttagccatc
aaggctttgaaagatgccaaaaaacatcttagttttgtcaaatcttgcatagcgtttggt
gaagtcacattaccttctatctcagctcagatcaagcagttaaatctttatcttgagact
gcagaggttgccttggtatgtggtttagtctctcattcagatggactgatagattctgca
atcagctgtttgctaagtttggactgcgtggatggctcccgaacaactgatattgaaggc
atactgtctgcaattcagaaattattttgtctcttgattatggttccaggtaatcctgag
caaggagtcacctactttgcaaacaacattttagcacttgttaattcaagctcatggatg
acaccagcaatgagaacaagaattttttgtacgacactcacattgacagctaccctatct
caaaataagctcccataccatgcagttcacggagagatttttggcaatgacctattgttt
tttggtgattcatcctatttacacgaacttgtcttgttatctgagtctgttcttcagaac
gtggttgattccattcagaaagagccatccccggctggtcgtggatgcatagcgcttgaa
gcttgcaactgtattgcatcatctttcgtggtaagtcccgaaatatctcaaatctgctcc
aaactgatagaaactgccaagtcttgtttgagtgccaacgacaaatatctacagtcgacc
attaaatttttggacaaaaacttgcgagctcctgtagtggctgtatcatccgttgctgtc
tga
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