Carya illinoinensis (pecan): 122281585
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Entry
122281585 CDS
T08745
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122281585
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122281585
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122281585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf_RING_Vps8
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_Vps41
zinc_ribbon_16
PHD_NSD
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
122281585
NCBI-ProteinID:
XP_042949137
LinkDB
All DBs
Position
11
Genome browser
AA seq
550 aa
AA seq
DB search
MGQRNILCPNQMIGLEPDRNGQNYLHPDPCILFGANTNFAQPNIRNMVSSSGSLANVDLQ
YSVEHCNNPMIYGMPQYNGMQRHPNLDLAVAPAGNFYYSYMTPSSGGGALPAPQSHGASG
QLPSSSSYGVIGISADEHGSNGHFTDDIRGPCKRKYAEGIPGSFQHNVASSSASSSASPL
NTRHPDGVAVMDVTSFDLSLHRGAGTPSLMEVGPQSSLRNRSGATGMDSLMMHEHNHLVR
GNYMGQPFQPAGALWLDQQLSSTSGDGGTWNQPPAMPYVHGSNANGGSMETRSVGVPGYH
DAATNRTPPSFQHPPPVNHRHHSHHHPSPPMIGVRGPNINFQPQVAAPVYRGSTNSSRST
LNPAQNSFEMDLRHLGSVLPTGLRIYRPHRGGFVSEANLRHHNMPHLRVLQAEETAILDM
PNFYEVGNSMDHHRDMRLDIEHMSYEDLLALGEQIGNVSTGLSEETVTSQLRTKTYASSA
SVINLEEAPSGDQEVDSCIICQDEYKNQEKIGILDCGHEYHAGCLKKWLLLKNVCPICKS
EALTTGRKDV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggggcagagaaatatactatgccctaatcagatgattggtcttgaaccagatcggaat
ggccagaattatctccatcctgatccttgcatccttttcggggccaatacaaactttgca
caacccaatattcggaatatggtatcatcttcagggagcctagctaatgttgacctccaa
tattcagtagagcactgcaacaatcccatgatctatgggatgccgcagtacaatggaatg
cagcgtcatcctaatctcgatttagctgttgcacctgcaggcaacttttattattcttac
atgacaccatcatctggtggtggggcattgcctgctccccaaagccatggggcctctggt
cagttgccatcttctagcagttatggagtcattggaatatctgcagatgagcatggaagc
aacggacactttacggatgacatcaggggtccatgcaagagaaaatatgctgaaggaatt
ccggggagttttcaacataatgttgcctcatcaagcgctagttcttcagcttcccctttg
aatacaaggcatccagatggggttgctgtgatggatgttacctcttttgacctgtctctg
cacagaggggctggtactccatcactcatggaagtaggaccgcagagtagtttgaggaac
agatcaggtgctactgggatggattctcttatgatgcatgaacataatcatttggttcga
ggaaattatatgggacagccttttcaaccagcgggtgctctctggttggatcaacagttg
agcagtacgtctggtgatggaggtacctggaaccagcctcctgcaatgccttatgtgcac
gggagcaatgccaatggaggttctatggagactcgcagcgtgggtgtgccaggatatcat
gatgcagctaccaacagaactccccctagtttccagcatcctcctcccgtcaatcaccgc
caccacagccatcaccatccaagcccgccaatgataggagtgaggggcccgaatattaac
tttcaacctcaagtagctgcacctgtatatagaggttctacaaattcttctcgcagcact
ctgaatcctgctcagaacagttttgagatggatcttaggcatctgggatctgttctaccg
actgggcttcggatataccgtcctcacagagggggatttgtgtcagaggcaaaccttaga
catcacaacatgccacacctgagagttctgcaggctgaagaaactgccatactagatatg
ccaaacttttatgaggtggggaattcgatggaccatcacagagacatgaggctggatata
gagcacatgtcttatgaggaccttcttgctttgggggaacagattgggaatgtgagcacc
gggttgtcagaggaaactgtcacaagtcaattaaggacaaaaacctatgcatcatctgct
tctgttataaatctggaggaggcaccttctggggatcaggaagttgattcttgcattata
tgccaggatgaatataagaaccaagagaaaattggtattcttgattgtgggcatgaatat
catgcgggttgcttgaagaagtggctgctcctgaagaatgtctgccccatctgcaaatcc
gaagcactgaccacaggaaggaaggatgtatag
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