Carya illinoinensis (pecan): 122281604
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Entry
122281604 CDS
T08745
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00061
Fatty acid biosynthesis
cill00071
Fatty acid degradation
cill01100
Metabolic pathways
cill01212
Fatty acid metabolism
cill04146
Peroxisome
Module
cill_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122281604
00071 Fatty acid degradation
122281604
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122281604
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cill01004
]
122281604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122281604
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122281604
Lipid biosynthesis proteins [BR:
cill01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122281604
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of breast milk
122281604
Exosomal proteins of breast cancer cells
122281604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1858
Motif
Other DBs
NCBI-GeneID:
122281604
NCBI-ProteinID:
XP_042949186
LinkDB
All DBs
Position
11:35051886..35059751
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AA seq
662 aa
AA seq
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MARYNFLVEVEKAKEANDGRPSMGPVYRSVFAKDGFPPPIDGMDSCWDVFRMTVERYPEN
PMLGRREILNGKPGNYVWQTYKEVYDLVIKVGNAMRSCGLGEGAKCGIYGVNSPEWIISM
EACNAHGLYCVPLYDTLGAGAVEFVICHAEVSIVFSEEKKISEVLKTFPKTTEYLKTLVS
FGKVTPEQRKEVEKFGLAIYSWDEFLRLGDGKQFDLPVKKKSDVCTIMYTSGTTGDPKGV
MISNESIIALLAGVKRLLESVNEKLDENDVYLSYLPLAHIFDRVIEELFILHGASIGFWR
GDVKLLIEDIGELKPTIFCAVPRVLDRIYSGLNQKVSSGGFLKKTIFNFAYQHKFRNMKK
GSKHEQASPIFDKFVFSQVKQGLGGKVRLILSGAAPLSTHVETFLRVVACAHVIQGYGLT
ETCAGTFVSLPNELSMLGTVGPPVPNVDVCLESVPEMGYDACSSTPRGEVCVKGKTLFSG
YYKREDLTKEVMVDGWCHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYGL
VTAIDSIWVYGNSFESFLVAVVNPNKEALERWAEENGVNGDFNSVCENPRAKEYILGELA
KISKEKKLKGFEYIKAVHLDPEPFDMERDLITPTFKKRRPQLLKYYQNVIDSMYKSANKP
GA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcacggtataattttctagtcgaagtagagaaggccaaggaggccaacgatgggagg
ccgtcgatggggccggtttaccgcagcgttttcgccaaggatggatttcctcctccgatt
gatggaatggatagttgctgggatgttttccgcatgactgtcgagagatatccagaaaat
ccgatgcttggtcgtcgtgaaattttgaatggaaagcccggcaattacgtatggcaaact
tataaagaagtatatgacttagtaattaaagttggaaatgcaatgcgaagttgtggtctt
ggggaaggagcaaaatgtggtatttatggtgtcaattctccagagtggattataagcatg
gaggcctgcaacgcgcatgggctatattgtgtcccgttatatgacactctaggtgctggg
gccgtagaatttgttatatgccatgcagaggtttctattgttttttctgaagagaaaaag
atttctgaggtgttgaaaacctttcctaaaacaacagagtacctcaaaacgcttgtgagc
tttggcaaggttacacctgaacaaagaaaggaagttgagaagtttgggttggcaatatat
tcgtgggatgaatttttgcgactgggtgatggtaagcagtttgatcttccagtgaagaag
aaaagtgacgtgtgtactataatgtatactagtggaactactggggatcctaagggtgta
atgatatccaatgaaagcatcattgctcttttagctggggtgaagcgcctgctagagagt
gtcaatgaaaaattggatgagaatgatgtatatctgtcgtatcttcctcttgcacatatc
tttgatcgggtgattgaggagctatttattttacatggtgcctcgattggattctggcgt
ggggatgtcaagcttttgattgaagacattggggagctaaaaccaactattttctgtgcc
gtcccacgtgtgttagatagaatttactcaggtttaaatcagaaggtttcctctgggggc
ttcttgaagaagacaattttcaattttgcctatcaacataagtttcgtaacatgaagaag
ggaagcaaacatgaacaggcatctccaatttttgacaaatttgtctttagccaggtgaag
caagggcttggaggtaaggtacgccttatcctttctggagcagcacctctttctactcat
gtagaaactttcctaagagtggtggcatgtgctcatgttatacaaggatatggtctgacg
gaaacttgtgcggggacatttgtctcactgccaaatgaactgtctatgcttggcacagtg
ggccctccggtacccaatgtggatgtgtgcctagaatctgttcctgaaatgggatatgat
gcctgttcaagcacaccacgaggagaagtatgtgtaaaaggaaaaacattgttttcaggg
tactataaacgtgaagacctcaccaaagaggtcatggttgatgggtggtgccatacaggg
gatattggtgagtggcaaccagatggaagcttgaaaatcattgaccgcaagaagaatata
ttcaagctttctcaaggagaatatgttgccgttgaaaacttggagaacatttatggtctt
gtaacagctatagattcgatatgggtctatggaaacagctttgagtccttccttgtggct
gttgtgaaccccaacaaggaagcacttgagcgttgggctgaagaaaatggtgtcaatggg
gatttcaattctgtctgtgaaaatcccagggcaaaagaatacattcttggggagcttgca
aagatttctaaagaaaaaaagttgaaaggttttgagtatattaaagccgttcaccttgat
cctgagccatttgacatggaacgtgaccttatcactccaacctttaagaagaggaggccc
cagttgcttaaatattatcagaatgtcatcgacagcatgtacaagagcgcaaacaagccc
ggtgcgtga
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