Carya illinoinensis (pecan): 122281789
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Entry
122281789 CDS
T08745
Name
(RefSeq) DNA repair protein RadA isoform X1
KO
K04485
DNA repair protein RadA/Sms
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122281789
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
122281789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
AAA_22
NACHT
AAA_16
Lon_C
SLFN-g3_helicase
AAA_19
NTPase_1
nSTAND3
AAA_5
AAA_29
Motif
Other DBs
NCBI-GeneID:
122281789
NCBI-ProteinID:
XP_042949508
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All DBs
Position
1:50580823..50591976
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AA seq
654 aa
AA seq
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MDSFEYFIFSFVVHWLQWIRYLNTISIKKNMLFYFLLMLSEQSRRAKDKQLLGLDPRTSV
QHCCLEIGGFLYLKQNLLFKQTLGSHKHTLRMQGSDMRALRIFFSYKQLLNPSLPKSLSI
PRHVHSAFPLAAEQSSALSDPEPTGTTPRVWSTYSNDRNGGQEKPTGVLADIARSKKKGK
EKVSWVCTDCGHSDGQWWGSCRQCNAVGTLKRFSEGESEASVLEAASRSWIPQQARDVRP
LRLTDVNRGINQLKWRIPLYGPFGEEVSRVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAA
LIAEGHDLGRPAPVVYVSGEESVEQIGNRADRMTIGGDELFLYSGTNIEDILKKIQPLSP
RVLIVDSIQTVYLNGVTGSAGGLSQVKECTSALLCFAKKTNIPVLLIGHVTKSGEIAGPR
VLEHIVDVVLYMEGEKYSSHRLLRSVKNRFGSTDELGVLEMSQSGLQAVLNPSEMFLSEQ
YSDSDFLAGLAVAVIMDGSRTFLIEIQALCVSGSIDSRQVNGIQGSRADMIISVLMKQAS
LKLQENAIFLNVVSGVKLTETAGDLAIAAAICSSFLEFPIPNSTAFIGEVGLGGELRTVP
RMEKRVNTVAKLGYKICIVPKPAVESLGSQGFEGMEVIGCRNLKEVINTVFRTH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggattcatttgaatattttatttttagctttgtagttcattggttacagtggatacgc
tatcttaatacaatatcaattaaaaaaaatatgttattttattttttgctaatgctttcg
gagcagtctcgacgtgcaaaagacaaacagctacttggtctcgatcctcggaccagtgtt
cagcactgttgtcttgaaattggcgggttcctttacttgaagcaaaaccttcttttcaaa
caaaccctaggaagccacaagcacactcttcgcatgcaaggctcggatatgagggctctg
agaatcttcttctcctacaagcaactcctcaatccctccctccccaaatccctctctatt
ccccgccatgtccactccgcttttcctctcgccgcggaacaatccagtgccctatccgat
ccggaacccacaggaactacccctcgcgtttggtctacttacagtaacgaccggaatggg
ggtcaggagaagcctactggggtgctcgcggacatagctcggagtaagaaaaaagggaag
gaaaaagtttcctgggtatgcaccgattgcgggcactccgatgggcagtggtggggctcg
tgccgccagtgcaacgccgtcggtacgcttaagcggttttctgaaggggagtctgaggct
tcggttttggaggctgcatcgcggtcgtggatcccacagcaagccagagacgtgcggccg
ttgcggttgacggatgtgaacagagggattaatcagctgaaatggcgaattccgctgtat
ggacctttcggagaagaagtctctagggtgctcggtggtggtcttgtacccggttctttg
gttttagttggtggtgatcctggtgttggcaagagtacactcttgttgcagattgctgca
ttaatagctgaagggcatgatcttggtcgaccagccccagttgtgtacgtttctggtgaa
gagagtgtggagcaaattggaaacagagctgatcgaatgacgattggaggagatgaactt
ttcttatattctggcaccaatattgaggatatattgaaaaaaattcagcctctctcccct
cgggttcttattgttgattcaattcaaacagtttatttgaatggagtgactggaagcgct
ggtgggctctcacaggtgaaggaatgcacatcagcattgctatgttttgctaagaagaca
aacatccctgttcttttgattggacatgtgacaaaatcgggagagatagcagggcctcgt
gtcttggagcacatcgttgatgttgttttatatatggaaggagagaagtattcatcacat
cgtttgcttcggtctgtgaagaaccgttttggatccactgatgagcttggagtacttgaa
atgtcacagtcagggttgcaagctgttttgaaccccagtgagatgtttttaagtgagcaa
tactcagattcagacttcttagctggactagctgttgctgtaattatggatggatctcga
actttccttattgaaattcaggcattatgtgtatctgggtcgatagattcaaggcaagtt
aatggcattcaaggaagcagagctgacatgatcatttctgttcttatgaagcaagctagt
ctaaagcttcaagagaatgcaatcttcttaaatgttgtgagcggggtgaaactgactgaa
actgctggtgatcttgcaatagcggcagcaatttgcagcagttttttggagtttcccatt
cccaacagtactgcattcattggtgaagttggccttggtggtgagcttcgcacggtacct
agaatggagaaacgggtaaacacggtggcaaaactggggtataaaatatgtattgttccc
aagccagctgtggaatcattaggatctcaaggttttgagggaatggaagtcataggctgc
aggaatctgaaagaggttatcaacactgtgttcaggacgcactga
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