KEGG   Carya illinoinensis (pecan): 122281934
Entry
122281934         CDS       T08745                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cill03036]
    122281934
   03400 DNA repair and recombination proteins [BR:cill03400]
    122281934
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122281934
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122281934
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_EF3_N
Other DBs
NCBI-GeneID: 122281934
NCBI-ProteinID: XP_042949747
LinkDB
Position
1:50743279..50756353
AA seq 1156 aa
MAESSRLGQSIDSFVDASCSLTQQAASLDTITSLVKNDVLSVEGLVREMEMYLTTTDNII
RARGILLLGEVLARLVSKPLENATIHSLIGFFTDRLADWKCLRGALVGCLALMRRKRDAG
MVTDTDAKAVAHSFLQNLQVQSLGQHDRKLCFELLECLLECYPDSVAPLGDELVYGICEA
VDSEKDPQCLMLTFRIIEVLARLFPDQSGPLASFAGDLFEILGCYFPIHFTHPKAEDLGI
KRDDLSEALTLAFSSTPFFEPFAIPLLLEKLSSSLPFAKVDSLKYLSGCTLKYGAERMLK
HAGAIWLAIKDAIYNSIQEPALSFTSESLVGLGFQENEIAKEALTLLQRVIVQNDSLYLS
LIVKDEDINMILNTITIYESYNDIYLQGKLKLHVVGRFLSISARSSIASCNRVFESYFPR
LMEILGLPVKNLSGDHSPIVSSLISKRLNFGALYLCIELLASYRDLTAGFKEIASKSISA
SETCYSMLQSYSNLLTKAFCSTLATSPQDADIYFAAKGLQILATFPGYVSPMLTSEFESI
LITFMSIITLHFKKTLLWKLSLKALVNIGSFIDEYHESEKVSSYMGVVVEKIVSLVSLDD
FTMPFPLKLEAISGIGTSGLSYMLKIVQGLEEAIYTNLSEFYAHENMKSPDITVRLLECY
SNKVLPWIHENGSFDEVLLRFPVNVWSQIESHVDFSIQVQEMELLDATMTAMRHAVAFCS
VESQNKIIQKAYSVLSSSTFFPLKEFTSLTIQFQLGGLQLAQKIDNLSYRDEWILSLFAS
VVIAARPQTPIPNLKEILQLFMTTILKGSVPAAQALGSIVNKLGKESNELKISSDCALEE
ALETIFRTKLWNSHDNGAVMKCSGINNGSEMSFADSCLGVVNNNLPQIHAITGLSWIGKG
LLLRGHEKVKDVTMIFLEFLLENNKSDAFPLKQNSLESSCELDLHPSVIKSAADAFRILM
SDSEVCLNRKFHAVIRPLYKQRFFSTMMPILQPLIMKNDSSLSRSMLCRAFAHIISDTPL
TPILSEAKKLIPIILDCLSMLNKDIQDKDILYSLLLVLSGILTDKKGQEAVIENAHHVVN
NLTKLIVYPHMMLVRETAIQCLVAMSELPHARIYPMRIQVLRAISNALNDPKRAVRQEAV
RCRQAWASIASRSLHF
NT seq 3471 nt   +upstreamnt  +downstreamnt
atggcagaatcgtctcgcttgggtcagtccattgactccttcgtcgacgcgtcttgttcc
cttacacagcaggctgctagcttggacacaatcacttctcttgtgaagaatgatgtatta
tctgtggaaggactggtcagagagatggagatgtatttgaccacaactgataacatcatt
cgtgctagaggtatccttcttcttggagaagtactcgcacgtcttgtgtcaaagccatta
gagaatgctactatacatagcttgataggtttcttcaccgacagattggcagattggaaa
tgtttacgtggtgcactagttggttgcttggcactgatgaggaggaaacgtgatgctggg
atggtcactgacaccgatgcaaaagccgttgcccactcttttttacagaacctacaagtg
cagtctttaggacagcatgataggaagctttgctttgaacttctggagtgcctgttagaa
tgctatcctgattcagttgctccactgggtgatgagcttgtttatggaatctgtgaagct
gttgattcagaaaaggatcctcaatgcttaatgctgacatttcgtatcattgaagtactg
gcacgactatttccagatcaatctggtccacttgctagttttgctggggatctctttgaa
attctgggctgttattttcctattcactttacacatccaaaagcagaggatcttggtatc
aaaagagatgacctatcagaggcactaacgttagcattctcctccacacccttttttgag
ccatttgccattccattgcttcttgaaaaactttcttcttctctaccatttgcaaaggtt
gattctctaaagtatctcagcggttgtacattgaagtatggagcagagagaatgttaaaa
catgctggagctatctggttggcaattaaagatgcaatatataactcaatacaagagccg
gctttatcctttacttcagaatcactagttggtcttggctttcaggagaatgaaattgct
aaagaagctttaacacttctccagcgggttattgtgcaaaatgatagtttgtatttaagt
ttgatcgttaaagatgaagacataaatatgattttgaataccatcaccatttacgagagt
tataatgatatttacttgcaaggcaagctgaaattacatgtagttggtcgtttcctctct
atttctgcaaggagttccattgcttcctgcaatagagtgtttgaaagttacttcccacga
ttgatggaaattctagggcttcccgtaaaaaacttgtccggggatcactcaccaattgtc
agttctttaatctccaaaagacttaattttggagctctttatctctgcattgagcttctt
gcatcatacagagatttgactgcaggcttcaaggaaattgcttccaaatccatttctgca
agtgagacatgctacagcatgcttcagagctattcgaatttattaactaaggccttttgt
tctaccttggcgactagtcctcaagatgcagatatttattttgcagcaaagggtttgcag
attctggctactttcccaggatatgtttctccaatgctgacatctgagtttgagagtatt
ttgatcacattcatgtcaattatcactctacatttcaagaagacattattatggaagttg
tcattgaaggcgttggtgaatattggctcatttattgatgaatatcatgagtctgagaag
gtttcaagctacatgggtgttgtagttgaaaagattgtttccttggtgtctcttgatgat
tttaccatgccttttccactcaaactggaagcaatatctggcattggcacaagtggactg
agttatatgctgaaaatcgtccaagggttggaagaagctatatacaccaatttatctgag
ttttatgcacatgaaaatatgaagtcacctgacatcaccgtccggctcttggaatgctac
tctaataaggtgcttccatggatccatgaaaatggaagttttgacgaagtgttgttgcgc
tttcctgttaatgtatggagccaaattgaaagtcatgttgattttagtattcaagtccaa
gaaatggagcttcttgatgcaacaatgactgcaatgaggcatgctgttgcattttgttca
gtggaaagccaaaacaaaataatccagaaagcctacagcgttctttcatcaagcactttt
tttccactgaaggaattcacgtccctaaccattcaatttcaactgggtgggctacagctt
gctcagaagatagacaatttgtcctatagagatgaatggattctttcattatttgcatct
gtagttatagcagctcgtcctcaaactcccattccaaatcttaaagaaatattgcaatta
tttatgactacaattctcaagggttctgttccagcagctcaggcattgggttccatagtt
aacaaattgggtaaagagtccaatgagttaaagatttcaagtgactgtgccttggaagaa
gctctagaaaccatttttcgaactaagttatggaattctcatgataatggtgctgtaatg
aaatgtagtggaataaataatggaagtgaaatgagctttgctgattcatgccttggtgtg
gtgaacaataatttgccccagatacatgccattactggactatcatggattggaaaaggc
ttgcttctgagaggtcatgaaaaggttaaagatgtaactatgatttttctggagttttta
ctggaaaataacaaatcagatgcttttccattaaagcagaattcactagagagcagttgt
gagctggatttgcatccttccgtgataaaaagtgcggcagatgcatttcgtattctaatg
agtgattctgaagtttgtttgaaccgaaaattccatgcagtgatacgaccactctataag
caacgttttttctctaccatgatgcccattttgcagcctttgataatgaaaaatgattca
tcactttccagatctatgctgtgtcgggcttttgcacatatcatatctgatactccacta
actcctattctgagtgaagccaagaagcttatacctatcattctggattgcttgtccatg
ctgaacaaggatattcaggataaagatatattgtacagtctcctgctagtcttatctggg
atattgacagataaaaaggggcaagaagctgtcattgagaatgctcatcatgttgttaat
aaccttaccaagcttattgtctatcctcatatgatgcttgttcgggagacagctatacag
tgtctggttgccatgtccgagctgcctcatgcaaggatctaccccatgagaatacaggtg
cttcgggctatatcaaatgctcttaacgatcccaagagggctgttcgtcaggaagctgtc
agatgccggcaggcatgggcatcaatcgcatcgagaagtcttcatttctga

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