Carya illinoinensis (pecan): 122281983
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Entry
122281983 CDS
T08745
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122281983
Membrane trafficking [BR:
cill04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
122281983
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
bL31_N
Motif
Other DBs
NCBI-GeneID:
122281983
NCBI-ProteinID:
XP_042949810
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Position
11:41529053..41543704
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AA seq
1258 aa
AA seq
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MANFLAQFQTIKNSCDHLVIAVEDVSDLWPIVKDWFEERLPFKRASLNNKTRNPVFVEKL
AAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFRTILKPRLKLIVQNDER
EWFIVFVSKAQPNNENATKSAKKVYARLEVEFSSKKRERCCKLDIHCPEANFWEDLESKI
MESIRNTLDRRVQFYEDEIRKLSEQRFMPVWNFCNFFILKESLAFMFEMAHLFEDALREY
DELELCYLETVNMIGKQRDFGGVDRGDDQAVLLNPGNKPLTQIVQDDSFREFEFRQYLFA
CQSKLLFKLNRAFEVASRGYSFIISFSKALALHENILPFCMREVWVITACLDVVNATASH
YVDGLVAPDIEKEFYRLQGDLYSLCRVKFMRLAYLIGYGTEIERSPVNSASLSMLPWPKP
AIWPSVPPDALSEVFSKEKMILQETRRVKHFGIQRKPLPLEPSLLLREANRRRASLSAGN
MFEMFEGRPVFNEGSGSEASTKMSPSQKVRSGVMSRTNSSPGNFESAIDRPMRLAEIYIA
AEHALQHTISNPSLWKSLSALEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVCF
KHRNIDLAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDEAGYLSSCVRLLSLDK
GLFSSKERQAFQLEVVNLAHSEMKNPVPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVW
SGFPDDITLDSLSLTLMATSNGDEGVKALRSTSATVLEPGRNNITLDLPPQKPGSYVLGV
LTGQIGHLRFRSHSFSKGAPVDGDDFMIYEKPTRPILKVFKPRALVDLAAAISSALLINE
PQWVGIIVRPMDYSLKDAVLQIDTGPGLAIEKSHVIEMESYADVSQSAADVGKSDAAHKN
GSLAIDKHFEQLRLNDGRIVFPGWANNVTSVLWIPIRAISDRLARGSSSVSPQRQSIVDG
MRTIALKLEFGVSHNQIFERTLAVHFTDPFHVNTRIADKCNDGTLLLQVILQSEVKATLT
IYDAWLDLQDGFAHTRKGDGRPNPGFIPLVISPNSRAGILFSICFEMSNAEEEAKAPQPD
SILNIRYGISGDRTIGAHPPAVESPGPEVVRQDLIFRSALVLKRPVLDPCLAVGFLPLRS
GGLRVGQLVNMKWRVERLKDFEENEVLKDDDEVLYEVNANSDNWMIAGRKRGHASLSMKQ
GSRIVITILCVPLVAGYVRPPQLGLPDVDEANISCNPAGPHLVCVLPPALSSSFCIPA
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactttctagctcagttccagacgatcaagaattcctgtgatcacctcgttatt
gcagtggaagacgtgagtgatttgtggcccattgtcaaggattggtttgaggagcggttg
ccattcaaaagagcatctttaaacaacaagacccgtaatcccgtgtttgtggagaaattg
gctgcggagttcatattaacaacagattcaagacttcgtagccgcttccctcaggagcaa
ttgttattttggtttcgggagccatatgcaactgttgttcttgttacctgtgaggatctt
gatgagttcagaacaattcttaaaccacgcctgaagttgattgtccagaatgacgagcgg
gagtggtttattgtatttgtgtctaaggctcaaccaaataatgagaatgccaccaaatct
gcgaaaaaagtatatgccagacttgaagttgaatttagttcaaaaaagagagaaaggtgc
tgcaaattagatatacactgccctgaagcaaatttttgggaagacctggagtccaagatt
atggaatccatcagaaatactttggataggcgtgtacagttttatgaggatgagatacgc
aaactcagtgaacaaagattcatgccagtctggaacttctgtaatttttttatcttgaag
gaaagcctggcttttatgtttgagatggctcatctttttgaagatgcattacgagagtat
gatgaactagaactctgctatttggaaacagtcaatatgattgggaaacagagagacttt
ggaggagtagaccgtggtgatgatcaggcagtattgcttaatcctggaaacaaaccgttg
acacaaattgttcaagatgattcgtttcgggagtttgaatttaggcagtatctctttgcc
tgtcaatcaaagcttctgtttaagctgaatcgcgcctttgaggttgcatcaaggggttat
tcattcataataagcttctcaaaggccctggcactgcatgagaatatactgcccttttgt
atgcgtgaagtttgggtaataactgcttgcttggatgtagtcaatgcaactgcttctcat
tatgttgatggactcgtggcacctgatatagaaaaggagttctaccgacttcagggtgac
ctttattcactgtgccgggttaagttcatgaggcttgcatatttaattggttatggaaca
gagatagaaagaagtcctgtcaacagtgcttcactcagcatgcttccttggcctaagcca
gcaatttggccttcagtccctcctgatgctttatctgaggttttttcaaaggaaaagatg
attctccaagaaactcgtagagtcaagcacttcggtattcaaaggaaaccattgcctctt
gaaccttcccttcttttgcgtgaggctaatagacgaagggcttctctttctgctggaaat
atgtttgaaatgtttgaaggtcgcccagtttttaatgaaggatcaggttcagaagcatcc
acaaagatgtccccatcacaaaaagtccgttcaggtgttatgtcacgcactaactcttca
ccaggaaattttgagagcgcaattgaccgacctatgagacttgctgagatttatattgct
gctgagcatgctttgcagcatacaatttctaatcccagtctatggaaatctttatcagct
ttagaggagtttgagcaaaaatatctcgagctaactaaaggtgctgctgataattaccat
cgctcctggtggaaaagacatggagttgtccttgatggtgaaatagcggctgtctgcttc
aaacacagaaatattgatctggcagcaaaatcatatgagaaggtttgtgccctgtatgct
ggtgaaggatggcaggatttattggctgaagtcctacccaatttagcagagtgtcagaag
atacttaatgatgaagctggttacctatcatcttgtgtgagattgctttcactagacaaa
ggcttattttcgtccaaggaacgccaagcttttcagttggaagttgttaatcttgcacac
agcgaaatgaagaaccctgtacccttagatgtatcttctttaattacgttttcaggcaat
cctgggcccccactggagctgtgtgatggggatcctggtaccttatctgtgactgtttgg
agtggctttcctgatgatataactcttgattcactcagtctcacgttgatggctacatct
aatggtgatgagggtgtgaaggcattaaggagcacttctgctactgttctagagcctggt
cggaataatattaccctggatctaccccctcaaaaaccaggttcctatgtcttgggagtt
ctcactgggcagattgggcacttgcggtttagatctcatagtttttccaagggtgcccct
gtagacggtgacgattttatgatttatgaaaagcctactagacctatcttgaaggttttc
aagccaagagctctggttgatcttgcggcagctatttcatctgctttgctaataaatgaa
cctcagtgggttggaatcatagtacggccaatggactactccctcaaagatgcggtattg
cagatagataccggtccaggtctagcaattgaaaagtcccatgtcattgagatggagagt
tatgctgatgtgtcacagagcgctgctgacgtgggaaagtctgatgctgctcacaaaaat
ggttctttggccattgataaacattttgagcagttgagactcaatgatggcaggatagtg
tttccgggttgggcaaacaatgttacttctgttctgtggattccaatacgtgccattagt
gacaggcttgcaagaggctcgtcttcagtttcccctcagaggcagagtattgtggatgga
atgaggacaatagctctaaagcttgaatttggagtatctcacaaccagatattcgagagg
accctagctgtccattttactgaccctttccatgtgaacacacgcattgcagataaatgc
aatgatggaactttgcttctgcaggtgatactacaatcagaagtgaaggccacattgacc
atttatgatgcttggcttgatcttcaagatgggtttgctcatactagaaaaggtgatggg
aggccaaatccaggcttcatcccgcttgtcatttctcctaattctagagcaggaatcctg
ttcagcatatgctttgagatgtcaaatgcagaagaggaagccaaagcaccacaacctgat
agcatattaaatatcagatatggtatttctggcgatagaactattggagcacatccacct
gccgttgaatctcctggacctgaggttgttagacaggatttgatcttcaggagtgctctt
gttttgaagaggcctgtgcttgacccgtgcctggctgttggttttcttcctcttcgttct
ggtggcctcagagttggtcaacttgttaacatgaaatggagggttgagaggttaaaagac
ttcgaggagaatgaggttttgaaagacgatgacgaggtgttatatgaagtcaatgcaaat
tcagataattggatgattgctggtaggaaaagagggcatgcgtctctctccatgaagcaa
ggttcaagaatagttatcacaatattgtgcgtgccgctggtggcgggttacgttcgtcct
ccacaacttggactgccagatgtagatgaggctaatataagttgcaatcctgccgggccc
caccttgtctgtgtcttgcctccagctctcagctcctccttctgcattccagcatga
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