KEGG   Carya illinoinensis (pecan): 122282082
Entry
122282082         CDS       T08745                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
  KO
K12897  transformer-2 protein
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122282082
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cill01009]
    122282082
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122282082
Protein phosphatases and associated proteins [BR:cill01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122282082
Spliceosome [BR:cill03041]
 Common components
  Common spliceosomal components
   SR proteins
    122282082
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 122282082
NCBI-ProteinID: XP_042949946
LinkDB
Position
11:36457616..36462489
AA seq 217 aa
MSYSREARSASPRDSISPVRRRRSRSRSISRSRRSRSRSRDSGDVANPGNNLYVTGLSTR
VTTSDVEKYFGGEGKVLECHLVTDPRTRESRGFGFITMETNEDAERCIKYLNRSVFEGRL
ITVEKGVVCPSFLPSLAKRKRGRTPTPGRYQGLRDNRQGYGRRRYRSFSPRRWQDKHSYS
KNRRGRSRSPYGRTDDYDSHRRRRERSWSAGPSGYTR
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtcatactcaagggaagcaaggtctgcctcgccacgggactctatttcacctgtcaga
cgtcgtcgatcaaggtcaagatcaatttcaaggtcaaggagaagtcggtccaggagccgt
gactctggagatgtagccaatcctgggaataacttgtatgtaacgggattgtccacaagg
gttactaccagtgatgttgaaaagtattttggcggcgaaggaaaggttttggagtgccat
ctggttaccgatcctcgcactagagaatcccgtggatttggctttatcaccatggaaaca
aatgaagatgcagaacgctgtatcaagtatttgaatcgttcggtctttgaaggccgattg
ataactgtggaaaagggggttgtatgcccgtctttccttccttcattagcaaaaaggaaa
cgaggcagaacacctacaccgggaaggtatcaaggtttaagagacaatagacaagggtat
ggtcgtagaaggtatcgaagcttttcacctcgccggtggcaagacaaacattcctattca
aagaaccggcgaggaagatcacgctctccatatggtaggacggatgattatgactcgcac
aggaggcgcagggaacgctcctggtcggctggacctagtggctacactagatag

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