Carya illinoinensis (pecan): 122282105
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Entry
122282105 CDS
T08745
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122282105
03400 DNA repair and recombination proteins [BR:
cill03400
]
122282105
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122282105
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
122282105
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
zf-C3HC4_2
DUF5797
RPA_interact_M
DUF6847
DNA_pol_A_exo1
DUF1517
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122282105
NCBI-ProteinID:
XP_042949995
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Position
11:complement(40809152..40813628)
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AA seq
254 aa
AA seq
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MASTSASRFDGATGKIKTAASTLYSDNQSLIAEIRKALNMMKEIAVDLERDNQSQKVKEL
ENTVVELLAAHEDCSHFSSAIKSVGDRYQPTGELSCFKKLLEEEIVKLKASSSSAPQKDR
ITRQFREAIWNVHHAGEPMPGEEQEDIVMTSTQCNLLNITCPLSGKPVTELSEPVRSLAC
KHVYEKKAVMLYMRSKNPRSQCPVAGCPKLLQAEKLVCDPLLLFEIDEMRTMSNQTARTD
VIEDCTELDEEGND
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacctcggcctcccggtttgacggcgccaccggaaaaatcaaaactgcagct
tctactctgtactccgacaatcagtccctcatcgccgaaattcgaaaggcgttgaatatg
atgaaggaaattgcggttgatttggagagagataatcagtctcagaaggtgaaggagctt
gaaaatactgttgttgaattgttggctgctcatgaagattgttcacatttttcatcagca
attaaatctgtaggagataggtaccagcctacaggagagttatcatgttttaagaagttg
cttgaggaggagattgtgaagctcaaggctagttcgtcttcagctccacaaaaagatcgt
ataacacgccaatttagagaagctatctggaatgttcatcatgctggagagccaatgcca
ggtgaagagcaggaggacattgtaatgactagtacccagtgcaaccttttgaatatcact
tgcccattaagtggaaagcctgttactgaactgtcagaacctgttcgcagcttggcttgc
aagcacgtttatgaaaagaaggctgtcatgctttacatgcggtccaagaatccacgttct
caatgccctgtagcaggttgccctaagttactgcaggcagaaaaattggtgtgtgatcca
ttgctgctttttgaaattgatgagatgcgcacaatgagtaatcaaactgctagaactgac
gtgatagaagattgtaccgagcttgatgaagaaggaaatgactga
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