Carya illinoinensis (pecan): 122282109
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Entry
122282109 CDS
T08745
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122282109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122282109
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122282109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_HPS5
Beta-prop_SPT8
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_DCAF4
Peptidase_M10_C
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
122282109
NCBI-ProteinID:
XP_042950000
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Position
11:complement(37777060..37782413)
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AA seq
549 aa
AA seq
DB search
MHPTFFNNKTLFSQKKTLKSQGDCLHASPSQAFLVETRKISLSLSLSLGKKDFCMEDPKV
QRFPAQSALGTPIPSSSSSGLNLTPTMPDEESVRSRYIERLINANYHPSPSRTIYSDRFI
PTRTGSNFGLFHLPAAPRQPSFSEGREDSSTSLYSTLLRTVLFGPESGVVSPVTPEKRSD
WTIPPSRNIFRYKTDTSQPLQSLFPFGSDDAMPGVNHSPVKTPRKIPQSPYKVLDAPALQ
DDFYLNLVDWSAHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDESVCSVGWAQSGTHLAV
GTRHGKVQIWDASRCKRVRAMGGHRLRVGALAWSSSFLSSGGRDKTIFQRDIRAQEDFVS
KLSGHKSEVCGLKWSYDDRELASGGNDNRLFVWNQNSTQPVLKFCEHTAAVKAIAWSPYV
HGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIV
WRYPAMSKLATLTGHTYRVLYLAISPDGKTVVTGAGDETLRFWNVFPSAKSQNTGSEIGA
SFLGRTTIR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaacgttctttaataataaaaccttgttctctcaaaagaaaactctcaaatct
cagggtgactgtcttcacgcttcgccgtcgcaagctttcctcgtcgaaacgcgcaaaatc
tctctctctctctctctctctctggggaaaaaggatttctgtatggaagatcccaaggtt
caaagatttcctgctcaatcagctctcggaaccccaatcccatcttcctcatcttcgggg
ctgaatctcaccccgactatgcccgacgaggagtcggtccgttcgcgctacatcgaacgc
ctaatcaacgccaactaccacccatcgccgtcgaggacgatctactcagataggttcatc
cccacccgaacgggctccaattttgggctcttccacctcccagccgccccgcggcagccc
agcttttccgagggccgagaggacagctccaccagcttatattccacgctcctacgcacg
gtactcttcggtcccgaatctggcgtggtctcgccggttacacccgagaagaggagcgac
tggacgataccgcccagccgtaatatcttccggtataagacggataccagccagcctttg
caatcactttttccatttgggtctgatgatgcaatgcctggggttaatcatagcccggta
aagactccccggaagatcccacagtctccttataaggttttggatgcgccagctttgcaa
gatgacttttatctgaatctggtggattggtccgcgcataatgtgttagcagtggggttg
ggaaactgtgtttacttgtggaatgcttgtagtagcaaggtaaccaaattatgtgacttg
ggcattgacgaaagtgtctgttcggtcggatgggctcagagcggtacacatcttgctgtt
ggaactagacatggaaaagtccagatttgggatgcatctcgctgtaagagggtaagagct
atggggggtcatcgattacgtgttggggccttagcctggagttcatcttttttgtcttct
ggtggccgggacaagactatttttcaacgagatatacgcgcccaggaagattttgtcagt
aaactctctggacacaagtcagaggtttgtggactaaagtggtcgtatgatgatcgtgaa
ttagcatctggcggcaatgataacagactttttgtttggaatcaaaattcaactcagcct
gtactgaaattctgtgagcatacagcagctgttaaagctattgcatggtctccatatgtt
catggacttcttgcatcaggcggtggaactgcagaccgatgtattcgtttctggaataca
accacaaactcacacttgagctgcatggacactggaagccaggtgtgcaatcttgtgtgg
tccaagaatgtcaatgaacttgtcagcacccatggatactcccaaaatcagataatagtt
tggagatatcctgccatgtcaaagttggcaactcttacgggccatacatatcgagttctc
tatcttgccatctcgcctgacggaaagaccgttgtcactggagctggagatgaaacactt
aggttttggaatgtgttcccttctgccaaatcacagaacacaggcagcgagattggagca
tcatttcttggaagaacaacaattcggtga
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