Carya illinoinensis (pecan): 122282144
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Entry
122282144 CDS
T08745
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122282144
Enzymes [BR:
cill01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
122282144
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
122282144
Prokaryotic type
122282144
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
122282144
NCBI-ProteinID:
XP_042950037
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All DBs
Position
1:complement(50997233..51003626)
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AA seq
981 aa
AA seq
DB search
MPQVTNLRLLFHSSFPLLSPLKPSLSLSKSKRHHSLFTVLSFKRHRKVPPQSPNLVRRNN
STLRESKGMDKGVPMEETTTVGFNKRRAEGRDNSDRPLKTLQLKVRTLNPANTISYVQIL
GTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETAGGL
PGLLLTLAGIGEEGMSVNVWGPSDMKYLVDAMRSFIPNAAMVHTRSFGPTLSNVAAIPGS
SKFPDPIVLIDDEVVKISAIILQPSCFEGSQHVNEEPVMQNASEKGLEGRIDHVSKPLSP
NRKTGSAIKPGDMSVIYVCELPEIKGKFDPAKAMALGLKPGPKYRELQLGNSVKSDRQNI
MVHPSDVMGPSVPGPIVFLVDCPTESHLEELLSIQSLSSYYADHSGNPTDGAKTVTCIIH
LSPASVIGSSNYQRWMERFGSAQHILAGHEMRNVEIPILKSSARIAARLNYLCPQFFPAP
GFWSLQQLNYSASDSIAPSEGPVSKLCERVSAENLLKFTLRPYAHLGLDRACIPCTMAPS
KIIEELLSEIPEIEDAAQHVSQFWHRSSETVETTLMQDNDVVVEEPWLNENNLPSCLDNI
RRDDLEIVLLGTGSSQPSKYRNVSSVYINLFSKGSLLLDCGEGTLGQLKRRYGVEGADNA
VRGLRCIWISHIHADHHTGLARILALRRNLLEGVPHEPILVVGPRQLKKYLDAYQRLEDL
NMQFLDCKHTTESSWDSFEGIAESKDCSSPGSPINAEYMNKTNSDGPVGQSTDCTLFARG
SRMQSYWKRPGGQVDNTVALLLKSLKKVLGEAGLEVLLSFNVVHCPQAFGVMLKAAERIN
GVGKVIPGWKIVYSGDTRPCPELIEASCGATVLIHEATFEDSMHQEAVARNHSTTKEAVE
VGNSAGVYRIILTHFSQRYPKIPIFDETHMHKTCIAFDMMSVNIADLPVLPKVLPYLKLL
FQNEMIVDESDDVLDAATAAS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagtcacaaacctccgcctcctcttccactcttcctttcctctcctttccccc
cttaaaccctctctgtccctctccaagtctaaacgccatcattctctcttcaccgtcctc
tccttcaaacggcaccgcaaagttcctcctcaatctcccaatcttgttcgcagaaacaat
agcactcttagagagagcaaaggtatggacaaaggggttccgatggaggaaactacgact
gttggattcaataagagaagggctgagggcagagacaatagtgataggcccctgaagacc
ctgcagttgaaagtgcgcacgctcaaccctgccaataccatatcttatgtccagatattg
gggacaggaatggatacgcaggatacatcgccttcagtcttgcttttttttgacaagcaa
agatttatttttaatgctggagagggattgcaacgattctgtacagagcataagattaag
ttatcaaagattgatcacatttttctctctcgtgtctgctcagagactgctggtggactt
ccaggtttgctgttgactttggctggcattggagaagaaggaatgtctgtcaatgtttgg
ggtccatcggatatgaagtatctagttgatgccatgaggtctttcatcccaaatgctgcc
atggttcacactcggagctttgggcccacactttctaatgtagctgctatacccgggtcg
agtaagtttccagatcccattgttctcattgatgatgaggttgtcaaaatatcagccatt
atcctacagccaagttgcttcgaagggtcccaacacgtgaatgaagaacccgtcatgcag
aatgcttcagaaaagggtctggaagggaggatagatcatgtctccaaaccccttagtcca
aacagaaaaacaggatctgcaataaagcctggtgatatgtctgtaatttatgtctgtgaa
ttgcctgagattaaaggaaaatttgatccagccaaggccatggcacttggtcttaaacct
ggcccaaagtatcgcgaactgcaacttggcaattcagtgaagtcagatcgtcaaaacatc
atggtccatccaagtgatgtaatgggtccttctgttcctggtcccattgtattccttgtc
gattgcccaacggaatctcatttggaggagttgttgtccatacaatctctcagtagttat
tatgcagaccactcaggcaacccaacagatggtgctaagacagttacttgtattattcat
ttaagtcctgcatctgttataggtagttccaattatcagagatggatggaaagatttggt
tcagcccaacatatcctggctgggcatgaaatgaggaatgtggagattccaattctaaaa
tcaagtgcaagaattgcagcacgacttaattacttgtgtcctcagttttttccagctcca
ggtttttggtctcttcagcagcttaattactcagcatcagactccattgctccaagtgag
ggtccagtttcaaagctttgtgaaagagtctctgctgaaaatcttctcaagttcactctg
cgtccttatgctcatcttgggttggatagagcttgtattccatgtacaatggctccctcc
aaaatcattgaggagttactgtcagagattccagagattgaagatgctgcccaacatgtc
agtcagttctggcacaggtccagtgagacagtggagacaactctcatgcaagataatgat
gttgtcgttgaagagccatggttgaatgagaataatcttcctagttgtttggataatata
aggagagatgacttagagattgttcttcttgggactggttcatcccagccatctaaatac
cggaatgttagttctgtctacattaatcttttctcaaaaggaagtttgctattagattgt
ggtgaaggaacactgggacagctgaaaagaagatatggtgtagagggtgccgacaatgct
gtgagaggtctaaggtgcatttggatttctcatatacatgccgaccaccacactggtttg
gcaagaatacttgctttgcgacgtaatttgttagagggagtgcctcatgaaccaatactt
gttgtggggccaaggcagcttaagaaataccttgatgcataccaacgacttgaagattta
aatatgcagttcctcgattgcaagcataccaccgaatcttcatgggattcttttgagggt
attgctgaatcgaaggattgctcctctccaggaagtccaatcaatgctgagtatatgaac
aaaacgaactcagatgggccagtgggacagagtactgattgtactctctttgctagagga
tctcgtatgcagagctattggaagagaccgggtggtcaagttgacaataccgtggctttg
ctcctaaagagcttgaagaaagttctcggtgaagctggtttggaggtcttgcttagtttt
aatgttgtgcactgtccacaggcatttggtgttatgctaaaagcagcagagagaatcaat
ggtgttgggaaagtgataccggggtggaagattgtgtactcaggtgacactaggccctgc
ccagaactgatagaagcatcgtgtggtgctactgttctcatacatgaggcaacttttgaa
gatagcatgcatcaagaggctgttgcaagaaaccatagcacaacgaaggaagctgtagaa
gttgggaactctgccggcgtatatcgcattatccttacccacttcagccagagatatccc
aaaattccgatctttgatgagacacacatgcataagacatgcattgcatttgacatgatg
agtgttaatatagcagatttacctgtacttccaaaggttcttccatacttgaaactgctt
tttcaaaacgagatgatagttgacgagtcggatgatgttttagatgctgcaactgcagct
tcataa
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