Carya illinoinensis (pecan): 122282355
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Entry
122282355 CDS
T08745
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122282355
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122282355
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Baculo_LEF5_C
Methyltrn_RNA_2
Motif
Other DBs
NCBI-GeneID:
122282355
NCBI-ProteinID:
XP_042950248
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Position
11:28678392..28679060
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AA seq
222 aa
AA seq
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MVEIRSKRCKNSGIISASACCTGVTKKARREVCEPESDQKNKVVKVTDSAKAYRERVRKQ
LEEAFSGVASEADEGIRLDVEACDPVQVAASVESAMFEKIGWSNGVSEAKYQSVLFNLKD
TQNLDLRRKVLLGQIVPEVLVSMTAEEMASQKRERENVQIRLKTMKRCMHETDEKEKAST
DMFKCGRSGERKCSYYQLQARSADEPMTTYVTCVNCNNHWKL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggtggagattcggtcaaaacgatgcaagaacagtggtatcatttcagcatcagcttgc
tgcaccggggtaacaaaaaaagcgagaagggaggtttgtgaaccagagtcagatcagaag
aataaggttgttaaggtaacagactctgctaaggcttaccgtgaaagggttcgcaaacaa
ctagaggaggccttctccggcgttgcaagtgaagccgatgagggcattcggcttgatgta
gaagcatgtgaccctgttcaggttgctgcctccgtggaatctgcaatgttcgagaaaata
ggttggagtaacggggttagcgaggccaagtaccaatctgtattgttcaacctaaaggac
acccaaaatctggatttaaggagaaaggtacttcttggacagatcgtgccggaggtgctt
gtgagcatgactgcggaagagatggcaagccagaaaagggagcgtgaaaacgtccagatt
cggttgaagacaatgaaaagatgtatgcatgaaacggacgagaaagaaaaagcctctaca
gatatgttcaagtgtggaaggtctggtgagcgcaagtgcagttactatcaattgcaggca
aggagtgctgatgagccaatgacaacctatgtcacgtgcgtcaattgcaacaatcattgg
aagctttga
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