Carya illinoinensis (pecan): 122282454
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Entry
122282454 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122282454
KO
K17925
sorting nexin-13
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cill04990
]
122282454
Domain-containing proteins not elsewhere classified [BR:
cill04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122282454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
UPF0181
Motif
Other DBs
NCBI-GeneID:
122282454
NCBI-ProteinID:
XP_042950339
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All DBs
Position
1:51302181..51313040
Genome browser
AA seq
1112 aa
AA seq
DB search
MSTLRQQVSVRELVDEAKKRIVVLVICVVGLSYLMSLTSSSVWVNLPAAASLIIGLRYIS
LDFDMRRKAAAYNSNTSSANTLSQKIPIEQPKIVHKSDWRSKVNSPVVEDAIMDFTRHLV
SEWVTDLWYSKLTPDREGPEELLNIMNGVIGEISMRMKNINLIDLLTRDLINLVCIHLEL
FRANQAKIEKQHSGSLTNEHRDMELRRILANENKLHPALFSPEAEHKVLQHLMDGLISFT
FKPEDVQCLFFRYMARELLAGAVMRPVLNLASPRFVNERIEVLVLNMTKAKKGALTVEGA
SQSRSDESSRISSDHFSKFLDPTATGVELVQLKNDQSRTAANTSATDNANGNKDPLLSLD
PRSIRSLNSLPFNFQTSDEKGIQRNVSGGEWGDMLDQISRRKTQALAPEHFENMWTKGRD
YRKKVGENRVIGQVPQGSSAGKSVKVDHSKEISKTKEKNTVAKGNHSESSTVHSGYTDRL
PIVNSFLPTDRNISSRTSFISYEDDEQNNLMRLEEVDSGSSTSYTSEDEETGNVTGLDSP
GTKVWDGRSIRNLAISHIHHPLENSEGLVGKKTGKGHIHYQRLARTQAGCKRSRRSSQKT
HVWQEVERTSFLSGDGLDILSSAKGYANGEDSSDDYEIENSGRVQSGAAASSSAPSFSVP
ESHSLTVNSLHNTLSGASFFKLRCEVLGANIVRSGSKTFAVYSISVADVDNNSWSIKRRF
RHFEELHRRLKEFQEYNLHLPPKHFLSTGLDVPVIQERCKLLDKYLKKLMQLPTISRSIE
VWDFLSVDSQTYLFSNSFSIIETLSVDLEDKPSEKSKKLPNLLGPVTNNVSSRREHLGSE
SKEPAFHAKSNVMADGLRSNGKDARLQNYAASPTYLGNPVTGRDDNALEEASESLLDAAT
DPTLPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQILQLGMGDAFDDWLIEK
IQLLRKGSVIALGIRRVEQILWPDGIFITKHPKRRPPPSTNQSQNSPHGQQPTGISSPKL
TYEQQQEAVRRAKFVYELMIDNAPAAIVGLVGRKEYEQCAKDLYFFIQSSVCLKQLAFDL
LELLLLSAFPELDYVFKQLQEEKHKFGEFKEN
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctgaggcagcaggtgtcggttcgggaactcgtcgacgaagcgaagaagcgg
attgtggttctggtcatatgcgtcgttggattgtcgtacctcatgtccttgacaagctcc
tcagtttgggtcaacttgcctgctgctgcctccttaattatcggcctgcgttatatatct
ttagattttgacatgcggagaaaagctgcagcatacaacagcaacacatcctcagcaaat
actttatctcaaaagatacccattgaacaacctaaaattgttcataagtcagactggaga
agcaaagtgaattctcctgttgttgaggatgcaataatggactttacgaggcatctggtt
tctgagtgggttacagatctctggtactctaagttaacacctgatagagaaggcccggaa
gaactgttgaacatcatgaatggcgttattggggaaatttctatgcgcatgaagaatata
aatttaattgatctactgacaagggatcttattaatcttgtttgcattcacttggagctt
tttcgtgcaaatcaagcaaagattgaaaagcaacattcaggttcactgacaaatgaacat
cgagatatggaactaagacgcatccttgctaacgagaacaaattgcaccctgctctattt
tcgcctgaagctgagcacaaggttttgcagcatctgatggatggtcttatttctttcaca
ttcaagcctgaagatgtgcagtgccttttcttccgttacatggctagggagcttctagct
ggtgcagtaatgcgaccagtgctaaatctagctagtccgaggtttgttaatgaaagaatt
gaagtcttagtccttaacatgaccaaagcgaaaaaaggggccttgacagtagaaggggca
tctcagtccagatcagacgagtcttcaaggatttcatcggatcatttttctaagttcttg
gatcctactgctactggtgttgaactagtgcagttaaaaaatgatcagtctagaactgct
gcaaatacttctgcaacagataatgcaaatggaaataaagatccactgctttcccttgat
cctcgatcaatccgttcattgaactcattgcctttcaacttccaaacaagtgatgaaaaa
ggtattcaacgaaatgtctcaggaggggaatggggtgacatgttagatcagatttcccgc
agaaagactcaagcccttgctcctgaacattttgagaacatgtggacaaaaggtagggat
tatagaaagaaggtaggtgaaaatcgggtaattggacaagtaccacagggttcttcagca
gggaagtccgttaaagtggatcactcaaaggaaatatccaagaccaaagaaaagaacact
gtagccaagggtaatcactctgagagtagcactgttcactctggatatactgatcggctt
cccatagtaaactcattcctccctacagatcggaacatatcaagtcgcacttcatttatt
tcatatgaagatgatgaacaaaacaaccttatgcgtttggaggaggttgactcagggagc
agtacttcttatacatctgaagatgaagaaactggcaatgtgacaggccttgattctcct
ggaactaaagtatgggatggtagaagtatcagaaatctggctatttctcacattcatcac
ccacttgaaaattcagaaggccttgtaggaaagaagactggtaaagggcatattcactat
caaagattagctagaacccaggctggctgtaaaaggtctagacgaagcagtcagaagacc
catgtttggcaggaggttgagagaacaagtttcttgtctggcgatgggctggatatactt
agttccgcaaaaggatatgccaatggcgaggactctagtgatgattatgagattgaaaat
tcaggtagagttcaaagtggagcagctgcttcttcatccgcaccttctttttctgtacca
gaaagtcatagtttgactgttaattccctgcacaacacactgtcaggggcttcatttttt
aagttgagatgtgaggtattgggtgcgaatattgtgagaagtggctcaaaaacatttgct
gtttattctatatctgttgcagatgtagataataacagttggtcgatcaaaagaaggttt
cgtcactttgaggagctccatcggcgtctaaaagagtttcaggaatataatcttcatttg
ccaccaaagcattttctatcgacaggtttagatgtacctgtcattcaagaaaggtgtaaa
ttgcttgacaaatatttaaagaaactcatgcagcttccaacaatttcaagatcaattgaa
gtttgggactttctcagtgttgactctcagacttatctgttctcgaattccttttctatc
attgaaactttgtcagttgatctagaggataagccatcagaaaagagtaaaaagcttcca
aatttacttggacctgttaccaacaacgtatcttcaaggagagaacatttaggctccgaa
agtaaggagcctgcattccatgcgaagagtaatgttatggcagatgggctacgatcaaat
ggaaaagatgctaggctgcaaaactatgcagcttcacccacttacttggggaacccggta
acaggaagagatgacaatgctttggaagaggcatccgagtcgcttcttgatgctgctact
gacccaacccttcctacagagtgggtgccgccaaatttaagtgtccccatattagatttg
gtagatgtcatcttccagcttcaagatggcggatggatcaggcggaaggctttttgggtg
gccaaacagatactacaactaggaatgggtgatgcctttgatgattggttaattgaaaaa
atccagcttttgcgtaagggatcagttattgctttagggatcaggcgggttgagcagata
ctctggcctgatgggatattcataactaagcatccaaagcgacgaccaccaccatctact
aatcaatcccagaattcacctcatggccaacaaccgacaggaatatcttcacctaaactt
acttatgagcaacaacaggaggcagttcgacgtgcaaagtttgtatatgagctaatgatt
gataacgcgccagctgctatcgtaggtcttgttggtcgtaaggagtatgaacagtgtgca
aaggatctctatttctttattcagtcatccgtttgtttgaagcagcttgcttttgacctt
ctcgagttgctgctgttgtctgcgtttccagagctagattatgttttcaaacagttgcaa
gaagaaaagcataagtttggtgaatttaaggaaaattaa
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