Carya illinoinensis (pecan): 122282461
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Entry
122282461 CDS
T08745
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122282461
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122282461
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
122282461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
122282461
NCBI-ProteinID:
XP_042950346
LinkDB
All DBs
Position
1:51315358..51321011
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AA seq
920 aa
AA seq
DB search
MGEGSWYSKFPAFPYDPYSIQIDFMNALYHSLNQGGVSMLESPTGTGKTLSIICSALQWV
VDRRKQQNSAKGGEFDKNPANDGQLGSEDEPDWMRDFVMNKDNQVEEKKIKMKKFGVGFG
KPDKRSNQGNCKDLFSSGSKEEDFVTKKERENLQKKNDAVQMSDEEFLLEDYESDEEGAG
GTSKRKAGKGPHIPSSDEEEEEDQSDEEDDEEKLKVYFCSRTHSQLSQFIKELRKTVFAN
EVKIVCLGSRKNFCINEGVLKLGNSTRINDRCLELQKNKKNEVSKIKNLDTGGRIRRTKA
SSGCPMLRKSKLQRQFRSEVSQQGALDIEDLVSIGRKMGTCPYYGSRSMLPAADLVVLPY
QSLLSKSSRESLGLKLKNNIVIIDEAHNLADSLISMYDSKVTLMQLENVHFHVGRYFERF
RNLLGPGNRRYIQTLMVVSRAFLQILHENPSYADLSQDTEKTYRANGSSDSSLAINDFLF
SLNIDNINLVKLLQYIKESNIMHKVSGYGDKMASLQNCSTKHDTLECNEGSILPDFRALS
VILQSLTNNDGDGRIILSRSQTTCSRQGGYIKYVMLSGEKIFSEIVNQAHAVLLAGGTLQ
PIEETRERLFPWLPTNQLQFFSCSHIVPPESILPVAVSCGPSGQSFDFSYSSRSSLIMIQ
ELGLMLCNLVTVVPEGIVVFFSSFDYEGQVYDAWKASGILDRIMKKKCVFREPRKTTDVE
SVLKEYKETIDALSVEESKGNPASQSGAILLAVVGGKISEGINLSDGMGRCIVMVGLPYP
NPSDIELIERVKHIEGLGNSNSITPKFSVTNEAYNGDVEVGFDILRSCRRRGKEYYENLC
MKAVNQSIGRAIRHVNDYAAILLVDARYGSDPSNRNFSNTTNKLPQWIKERLVSSTQSYG
EVHRLLHQFFKFNKKRRECQ
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaggcagctggtactcaaaattcccggcatttccttacgacccgtattccatt
cagatcgacttcatgaacgccctctatcactctctcaaccaaggcggcgtctccatgctc
gaaagccccaccgggacaggtaaaactctgagtatcatttgtagtgctttgcaatgggta
gttgaccggaggaaacaacaaaattctgcaaaaggaggcgagttcgacaagaatccagca
aatgacggtcagcttggttcagaagatgagcctgattggatgagagactttgttatgaac
aaagacaaccaagtcgaggagaagaagattaagatgaagaaatttggtgttggttttggg
aaacctgataagagaagtaatcaaggaaattgcaaggatttgttttcgtcgggctcgaag
gaggaagattttgttacaaagaaagagcgagagaatttgcaaaagaaaaatgatgcagtg
cagatgagtgacgaggagttcttgttggaagattatgaaagtgacgaggaaggagctggt
gggacgtcaaagaggaaggctggtaagggtcctcatattccatcaagtgacgaggaagag
gaagaagatcagtctgatgaggaagacgatgaggagaagctgaaggtttatttttgtagt
cggacacattcgcagctttcacagttcataaaggaattaagaaagacagtttttgctaat
gaggtgaagattgtgtgtttaggctctaggaaaaatttctgcatcaatgaaggggtattg
aaacttggaaactccactcgaattaatgatcggtgcttggagcttcaaaaaaacaagaaa
aatgaggtctcaaaaattaagaatttagatacaggagggagaatacgcaggaccaaggcc
tcttctggatgcccaatgcttagaaaatccaaactacaaagacaattcagaagtgaggta
tctcaacaaggggccttggatattgaagatcttgttagcattggaagaaagatgggaact
tgtccatattatggctccagaagcatgctccctgcagctgatcttgtggttctaccctat
caatctcttctatcaaaatcatctcgtgaatcactaggcctaaagttgaagaataatatt
gtcataatagatgaggctcacaatctagctgactcacttatcagcatgtatgactcaaaa
gttactttgatgcagctggagaatgtacatttccacgtagggaggtactttgagagattt
cgcaatctgttgggacctggtaatcggagatatatccaaaccctgatggttgttagccgg
gcttttctccaaattttacatgagaatcccagttacgcagatctgtcccaagacactgaa
aagacttacagagcaaatggttcctctgattcctcactggccattaatgattttctattt
tcactcaatatcgacaacatcaacttggttaaattgcttcaatatataaaggaaagcaac
atcatgcacaaggtcagtggttatggagataaaatggctagcttgcaaaattgttcaaca
aagcatgacactttggaatgtaatgagggaagcattctgccagattttcgggcattatcg
gtcatattgcaatcactgacaaacaatgatggtgatgggaggataatcctctcaaggtct
caaacaacatgctccaggcaaggaggatacataaaatatgtcatgctttctggtgaaaag
atcttttcagagattgtgaaccaagcacatgctgttctactggctggaggaactctccaa
ccaatagaagaaacaagggagcgacttttcccatggctaccaacaaatcagttgcagttc
ttttcttgcagtcatattgtccctcctgagagtattctgccagttgcagtttcctgtggc
ccttctggtcagtcttttgattttagctacagctccagaagctcattaatcatgattcag
gagctggggcttatgctttgcaatttggttactgtagttcctgaaggaattgttgtcttc
ttctcttcgtttgactatgaaggacaggtctatgatgcatggaaggcttcaggcatcttg
gataggattatgaagaagaaatgtgtatttagggagcctagaaaaactactgatgtggaa
tctgttctcaaggaatataaggaaacaattgatgcattgtctgttgaggaatctaaagga
aatccagcttctcagagtggtgcaattctccttgctgttgttggtggaaagatatcagaa
ggcatcaacttgagtgatgggatgggtcgatgtatagtcatggttggactgccctatcct
aacccatctgacattgagttgattgagagggtgaagcatattgaaggtctgggaaattca
aatagcattactcccaagttttcagttactaatgaagcttacaatggagatgtggaggtt
gggtttgacatcctaagaagttgtagacgcagaggaaaagaatactatgaaaatctttgc
atgaaggctgtaaatcaatctattggcagagctattcggcatgtaaatgactatgcagcg
attttattggttgacgctaggtatggatctgatccctcaaacagaaacttctctaacaca
actaacaagcttccacagtggataaaagagcgtctagtttcctctactcaaagctatggt
gaagtacacaggctgctgcatcagttcttcaaattcaacaagaagagaagagagtgtcag
tag
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