KEGG   Carya illinoinensis (pecan): 122282613
Entry
122282613         CDS       T08745                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03083  Polycomb repressive complex
cill04120  Ubiquitin mediated proteolysis
cill04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122282613
   04120 Ubiquitin mediated proteolysis
    122282613
  09126 Chromosome
   03083 Polycomb repressive complex
    122282613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122282613
   04121 Ubiquitin system [BR:cill04121]
    122282613
   03036 Chromosome and associated proteins [BR:cill03036]
    122282613
Membrane trafficking [BR:cill04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122282613
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122282613
   Cul7 complex
     122282613
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122282613
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122282613
SSDB
Motif
Pfam: Skp1 Skp1_POZ Phage_TAC_12
Other DBs
NCBI-GeneID: 122282613
NCBI-ProteinID: XP_042950486
LinkDB
Position
11:complement(41628966..41629728)
AA seq 158 aa
MPSSSMQSTTGRMLKLKSKDDETFEVEEAVAVKSQIIKYMVEDGVSNGTIPLPNVDGKTL
ASVLQWCEKHADPTVTEDELNKYDAGFIDVDQAVLYDLLLAANYLNIEELLTLACKRVVD
MIKGKSPDEIRATFNIKNDFTPEEEEEVRKESAWAFGS
NT seq 477 nt   +upstreamnt  +downstreamnt
atgccatcgtcgtcgatgcagagtactactggccggatgctgaagttgaagagcaaagac
gatgaaactttcgaggtggaagaggccgtggccgtgaagtcccaaatcattaagtacatg
gtcgaggacggcgtttctaatgggacgatcccgttgccaaacgtcgacggcaagaccctg
gccagtgtgcttcagtggtgcgagaagcatgccgatcctaccgtcaccgaggatgaactc
aacaagtacgacgctggttttatcgacgttgatcaggctgttctctatgaccttctcttg
gcagcaaactaccttaatatcgaggagttgttgacactggcatgcaagagggttgtcgat
atgattaaaggaaaaagtccggatgagatacgtgcaaccttcaacatcaagaatgatttc
acccccgaagaagaggaagaagtcagaaaggagagtgcttgggcctttggctcctga

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