KEGG   Carya illinoinensis (pecan): 122282827
Entry
122282827         CDS       T08745                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:cill00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    122282827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122282827
   03029 Mitochondrial biogenesis [BR:cill03029]
    122282827
Membrane trafficking [BR:cill04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    122282827
 Others
  Specific organelles associated proteins
   Auto phagosome
    122282827
Mitochondrial biogenesis [BR:cill03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    122282827
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR90_beta-prop_4th ATG16 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF4 WDR54 Beta-prop_EIPR1 Beta-prop_RIG_1st Cytochrom_D1 PEP5_VPS11_N Beta-prop_Vps41 INO80E
Other DBs
NCBI-GeneID: 122282827
NCBI-ProteinID: XP_042950804
LinkDB
Position
11:complement(2007144..2011724)
AA seq 509 aa
MSQDQIAREAIKHALKSLRKRHLLEEGAHSPAFIALSRPIVSQGSEWKEKAENLELELQQ
CYKAQSRLSEQLVVEVAESRASKASLQEKEAAVSNLQAELTQTRDECFQLKADLEEKIKA
LELLICENHQLKAQLEEMTIKAKNAEAENKMLVDRWMLQKMQDAERLNEVNALYDEMVNR
LKASGLENLARQQVDGVVRRNEDGAEFFVESTVPSLCKQRIHAHEGGCASILFEYNSSKL
ISGGQDRSIKMWDTSTGSLSHTLYGCLGSVLDLTITHDNRSVIAASSSNNLYVWDVNSGR
VRHTLTGHTDKVCAVDVSKISSRHVVSTAYDRTIKVWDLNKGYCINTIIFPSNCNALCFS
MDGQTICSGHVDGNLRLWDIHSGKLLSEVAAHSLAVTSISLSRNGNVVLTSGRDNLHNLF
DMRSLEVCGTLRAIGNRVASNWSRSCISPDDNYVAAGSADGAVYIWSISKADIVSTLREH
TSPVLCCSWSGLGKPLASADKNGIICTWS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcacaggaccagatagcgagggaggcgataaagcacgctttgaagtctctacggaag
cggcatttgctcgaagaaggtgctcattctccggctttcatcgctctttccagaccaatc
gtctctcagggctcagaatggaaagagaaagcagaaaatctggagttggaactccagcaa
tgttacaaagctcaatctcggttgtccgagcaacttgtggtcgaagtagctgaatcccgg
gcttcaaaagcctcacttcaagagaaagaagcagctgtctcaaatctccaggcagagttg
actcaaacaagggatgaatgttttcaattgaaggcagacttggaagaaaagataaaagct
ttagaattgcttatatgtgagaaccatcaactcaaagctcaactggaagagatgactatt
aaagctaagaatgctgaggctgaaaataagatgttagttgatcgctggatgctgcagaag
atgcaggatgctgaacggctcaatgaggtaaatgcactttatgacgaaatggttaatcgg
ctcaaggccagtggtttagaaaatcttgctaggcagcaggttgatggtgttgttcgccga
aatgaagatggtgctgaattctttgtggagtcaactgttccctccctatgcaagcagagg
atacatgcccatgaaggtggttgtgcctccatattgtttgagtacaattcctccaaactc
attagtggaggacaggaccgatcaatcaagatgtgggacacgagcactggatcattaagt
catactctttatggttgccttgggtctgttcttgatcttaccattacccatgataataga
tctgtcattgctgcaagcagctcaaacaacttatatgtatgggatgtcaattcaggtcgt
gtacgccatactcttactggtcacacagataaagtttgtgctgtagatgtaagcaaaatc
tcaagtcgtcatgttgtcagtactgcttacgatcgtaccataaaagtttgggacttgaat
aagggttactgcatcaacacaatcattttccccagcaactgtaatgctctttgcttcagc
atggacggacaaaccatctgttctggtcatgttgatgggaatcttcgtttatgggacatt
cactcaggaaagctacttagtgaagttgccgcacattcacttgctgttacatctatctct
ttgtctcgaaatggaaatgtagtattgactagtggaagggacaacttgcataatttgttt
gatatgcgatcgctagaagtttgtggcacacttagagcgataggaaacagagtggcatca
aattggagccgatcctgtatcagtccagatgacaactatgtagctgctggatccgccgat
ggagctgtttatatttggtccatttctaaagctgatattgtcagcactctcagggaacac
acttctcctgtactgtgttgttcatggagtgggcttgggaaacctctagcctcggcagac
aagaatggaattatttgtacctggtcatga

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