Carya illinoinensis (pecan): 122282828
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Entry
122282828 CDS
T08745
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122282828
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122282828
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122282828
NCBI-ProteinID:
XP_042950805
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Position
11:1980711..1982777
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AA seq
408 aa
AA seq
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MASFCLHFVITFLLSLLLPTLIYSSPVQDPELVVQQVQRSINNASRIRRNLAYLSCGTGN
PIDDCWRCDPNWEQNRQKLADCAIGFGRNAIGGRDGKIYVVTDSSDDDAVNPKPGTLRYA
VVQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVNNIIIHGIN
IHDCKQGGNANVRSSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCADGLIDAIHGST
AITISNNYLTHHDKVMLLGHSDTYTQDKAMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWEMYAIGGSADPTINSQGNRFAAPDDRSSKEVTKHEDAPESEWKNWNWRSEGDLLI
NGAFFTASGAGASSSYAKASSLSARPSSLVGAITTSAGALNCRKGSHC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcttttgtttgcactttgtcatcaccttcctcctgtctctccttctcccaacc
ctcatttactcctccccagttcaggatccagagctagtagtacaacaagtacaaaggagc
atcaacaatgcctctcggatcaggaggaacctggcttatctttcttgcgggacaggcaac
ccaattgatgactgctggagatgtgaccccaattgggagcagaaccgccagaagctggct
gattgtgcaattgggtttgggaggaatgccattggtggaagagatggcaagatttatgtg
gtcacagactccagcgatgatgatgcagtgaacccaaagccagggactctgagatatgca
gtagtccaagatgagccattgtggatcatctttgcacgtgatatggtgataaagttgaag
gaagagctgattatgaattcgtttaagaccattgatgggaggggagcgagtgtgcacatt
gctgggggtccatgcattactgttcagtatgtgaacaacattataatccatggcataaat
atacatgactgtaaacaaggagggaatgctaatgtgaggagctccccatcgcactatggg
tggaggacgatctcggatggcgacggtgtgtcgatctttggcggtagccatgtgtgggtg
gaccattgctcactatcaaactgtgcagatgggctgattgatgcaattcatgggtctact
gccattaccatctcaaacaattacttgacacatcatgataaggtcatgttgttgggtcac
agcgatacttacactcaggacaaggccatgcaggtcaccatcgccttcaaccattttgga
gaagggcttgtccaaagaatgccaagatgtaggcacgggtacttccatgtagtgaacaat
gactacactcattgggaaatgtatgccattggagggagtgcagaccctactattaatagc
caaggaaacagatttgctgcaccagatgacagatccagcaaagaggtgaccaaacatgaa
gatgcaccagaaagtgaatggaagaactggaattggaggtctgagggagacctcttgata
aatggtgcattttttactgcatccggggctggggcttcatcaagctacgctaaggcttcc
agcttaagtgcaagaccatcttctcttgtcggtgcaattacaacgagtgctggtgcactt
aattgccgaaagggttctcattgctga
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