Carya illinoinensis (pecan): 122282842
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Entry
122282842 CDS
T08745
Name
(RefSeq) COP1-interactive protein 1
Organism
cill
Carya illinoinensis (pecan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-F_leu_zip
KIP1
HMMR_N
GAS
Crescentin
ATG16
HAP1_N
MscS_porin
Laminin_II
Filament
DUF4200
Tup_N
Siva
PhaC_N
Motif
Other DBs
NCBI-GeneID:
122282842
NCBI-ProteinID:
XP_042950819
LinkDB
All DBs
Position
11:complement(35288731..35297122)
Genome browser
AA seq
1547 aa
AA seq
DB search
MTKHRFRASIESLVGSHIDSENDEKLKEAKIEIEDNVKKILKLIKDQDPEEGDGTPESSK
NEVVAQLIDDFHKQYQSLYAQYDHLTGELRNKIHGKQGKENGSSSSSDSDLGYSSKDKGG
KNGQVGIEIQKASDSIKQELETAHREAADMERKLTAKNEEKEALNLDYLTALSKIQEADK
TIADMKTDSESLDFEKSKLMTENSELRKELEAAGKVQAELNRERDSLIMEKETAIKRIEE
GEKITEGLKTMLDQLKDEKVNLEQEVEAVRLEVSNMKEQRKSAEQHVSDLSHNLETSKKE
NKSLSLKISEISNEIQQAQNTIQELTAESSQFKEKLGEREKELSNLKYMQEAHEKDSSTL
VNGLEAQVKDLEQELESLRSQKSDMEVQIEIKETDFGNIKQQLVSAEQTVSDLSHALKAT
EEDNKSLTMKVSDLSHNLGTFKEENKSFSLKISEISNEIQQAQNTIQELTAESSQFKEKL
GEREKELSNLKYMQEVHEKDSSTQVNGLEAQVKDLEQELESLRSQKSDMEVQIENKETDF
GNIKQQLVSAEQTVSDLSHALKATEEDNKSLTMKISDLSHNLETSKEENKSLSLKIANEI
QQAQNTIRELTAESSQFKEKLGEREKELSNLKYMQEAHEKDSSTQVNGLEAQVKDLEQEL
ESLRSQKSDMEVQIENKETDFGNIKQQLVSAEQTVSDLSHALKATEEDNKSLTMKISDLS
HNLETSKEENKSLSLKIANEIQQAQNTIQELTAESSQFKEKLGEREKELSNLKYMLEAHE
KDSSTRVNGLEGQVKDLEQELESLRSQKSDMEVQIEIKETDFGNIKQQLVSAEQTVSDLS
HALKATEEDNKSLTMKVSDISNEVQQARNLIQELTAESSRLKENLGEREREFSILIERHG
VHENESSDRIKGLEGHVKGLELELELLQSQKREMEMQLESKAAEARELGEQHIELQARVT
EFEIMSKDREDEISALKREIEENKSESLSRITELTAEMNNLLVDLDSLRSQKGKLEEQIV
FTSDEASSQVKGLMDEANELQQKLETLHSEKIELEVQLEKKTNENSEYLIYVENLKEEIA
SKTLAQHSVLQERESLAVQVKNLESVVDIIRSQKSELEEQLGAKELDNIQWTEEKRGLRD
KIFELEKTVADRGFELSALHEKLKSGENETTAQIMNFEAKISNLQQELESFKTQKNEIEL
QFEREKQELSESLAQMENQKVELTSKITIHQRMLREQEDAYHKLNEEYEKLEGQLQECKL
NLGVAEKRIQETAEKFHKIIESKDQMVAELEEVAEELRRDLELKEDEHSSLVDNVRTIEV
KLRLSNQKLRVTEQLLTEKEEAFRITELKFQQEQRALEERIHILTGIITSNNEAHRRMIA
DISDRVNSTLTGLETVILKFEEDFKKYENCILEISNELQIAKNWVMETNKEKEQLKKELH
HLVEQLQDEKDKESSLRERVEKLEVKASREEIEKENMSKALKQLEKTVAELENLMKEKDD
GMLGLGEEKREAIRQLCVCIDYHRSRYDHLKEMLPKVTVRARGQRAS
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcatcgcttcagagcttctatagagtccttagttgggagtcacattgattca
gagaatgatgaaaaactgaaagaggctaaaatagaaattgaggacaatgtgaaaaagatc
ctgaagcttattaaagaccaagatcctgaagaaggagatggtaccccagaaagctccaaa
aatgaagtagttgctcaactaattgatgatttccacaaacagtaccagtcactctatgca
cagtatgatcatctaacaggagagctaaggaacaaaattcatggaaaacaaggaaaagag
aatggttcttcatctagctcagactcggacttggggtattcttcaaaggacaagggcggt
aagaatggacaagtgggaattgaaattcagaaagctagtgatagcatcaagcaagaactt
gaaacagcacatcgagaagctgctgatatggagaggaagttaacagctaagaatgaagaa
aaggaagctctaaatttggattatctcactgctttgagtaagatacaagaagctgacaaa
accattgcagatatgaagactgacagtgaaagtttggactttgaaaagtcaaaacttatg
actgagaatagtgaattgagaaaagaactggaggctgctggtaaggtacaagcagaattg
aatagagagagagatagcttgatcatggagaaagagactgccataaaaaggattgaggag
ggagagaagattacagaaggcttaaaaacaatgcttgatcagctgaaagatgaaaaagta
aacctggagcaagaggtagaagctgtcagattggaagtttccaatatgaaagagcagcgg
aaatctgcagagcagcatgtgtctgatttaagccacaacctggaaacttccaagaaagag
aacaaatctctcagcttaaaaatctcagaaatctcgaatgagattcagcaagcacagaac
acgatacaagaactcacagctgaatcaagtcagtttaaggagaaattgggtgagagggaa
aaggaactttcaaatctcaagtatatgcaggaggcacatgagaaggactcatctacccta
gtaaatgggctagaggcacaagtaaaagacctggaacaagagctggagtcattgcgatcc
cagaaaagcgatatggaagtgcagattgaaattaaagaaactgattttggcaatataaag
cagcagctagtatctgccgaacagacagtttcagatttaagccatgctctgaaagccacc
gaggaagataataaatctctgactatgaaagtctcagatttaagccacaacctgggaact
ttcaaggaagagaacaaatctttcagcttgaaaatctcagaaatctcgaatgagattcag
caggcacagaatacgatacaagaactcacagctgaatcaagtcagtttaaggagaaattg
ggtgagagggaaaaggaactttcaaatctcaagtatatgcaggaggtacatgagaaggac
tcatcaactcaagtaaatgggctagaggcacaagtaaaagacctggaacaagagctggag
tcattgcgatcccagaaaagtgacatggaagtgcagattgaaaataaagaaactgatttt
ggcaatataaagcagcagctggtatctgctgaacagacagtttcagatttaagccatgct
ctgaaagccaccgaggaagataataaatctctgactatgaaaatctcagatttaagccac
aacctggaaacttccaaggaagagaacaaatctctcagcttgaaaatcgcgaatgagatt
cagcaggcacagaacacgatacgagaactcacagctgaatcaagtcagtttaaggagaaa
ttgggtgagagggaaaaggaactttcaaatctcaagtatatgcaggaggcacatgagaag
gactcatcaactcaagtaaatgggctagaggcacaagtaaaagacctggaacaagagctg
gagtcattgcgatcccagaaaagtgacatggaagtgcagattgaaaataaagaaactgat
tttggcaatataaagcagcagctggtatctgctgaacagacagtttcagatttaagccat
gctctgaaagccaccgaggaagataataaatctctgactatgaaaatctcagatttaagc
cacaacctggaaacttccaaggaagagaacaaatctctcagcttgaaaatcgcgaatgag
attcagcaggcacagaacacgatacaagaactcacagctgaatcaagtcagtttaaggag
aaattgggtgagagggaaaaggagctttcaaatctcaagtatatgctggaggcacatgag
aaggactcatcaactcgagtaaatgggctagagggacaagtaaaagacctggaacaagag
ctggagtcattgcgatcccagaaaagcgatatggaagtgcagattgaaattaaagaaact
gattttggcaatataaagcagcagctggtatctgctgaacagacagtttccgatttaagt
catgctctgaaagccactgaggaagataataaatctctgactatgaaagtctcagatatt
tcaaatgaggttcagcaggcacggaacctaatacaggaactcacagccgaatcaagtcgg
ttaaaggagaatttaggcgagagggaaagagaattttcaattctcattgagaggcatggg
gtgcatgagaacgaatcatcagatcgaattaagggattggagggtcatgttaaaggcctg
gaactagaactggaattgttgcaaagccagaaaagagagatggaaatgcagttagagagt
aaagcagctgaagcaagagaactgggagaacaacatatagaactacaagcccgagttaca
gaatttgaaatcatgtcaaaggacagagaagatgagatatctgctctcaagagggaaatt
gaggagaacaagagtgaatctctgtctagaataactgaattgacggcagagatgaataat
ctgctggtggacttggattctttacgctctcagaaaggtaaattggaagaacagattgta
tttacaagtgatgaagcatcatctcaagtcaagggcttaatggatgaggccaatgaattg
cagcagaaactggagacactacatagcgagaaaatcgagttagaagtacaacttgagaaa
aaaactaatgaaaattcagaatatctgatttatgtagaaaatctgaaggaggagatagca
agcaagaccctggcccaacatagtgttttacaagagagagaaagtttagcagtgcaagta
aagaatcttgaatctgtggtggacattatccgcagtcagaaaagtgaacttgaagagcag
cttggcgctaaagaactcgacaacattcaatggacagaggagaagcgggggcttcgtgac
aagatttttgaactggagaaaacagtggcagatagagggttcgagttatctgctctgcac
gaaaaacttaaaagtggagagaatgaaactactgctcaaataatgaactttgaggcaaag
attagcaatctacaacaggagttggaatccttcaaaacccagaaaaatgagatagagttg
cagtttgaaagagagaaacaggaactttcagaaagtctggcccaaatggagaatcaaaaa
gttgagttaacgagcaagatcaccattcatcagagaatgctgagagaacaggaggatgca
taccacaaactaaatgaggaatatgaaaagctcgaaggtcagcttcaggaatgcaagtta
aatcttggagttgcagagaagaggattcaggaaacagcagagaaattccataagatcatt
gaatccaaagatcagatggtagctgaattggaagaagtggctgaagaactaagaagagat
ctagaattaaaagaagatgaacacagttctttagttgataatgtccgtacaattgaagtt
aagctccgcctgtcaaaccagaagctccgggtcaccgaacagttactaactgaaaaggaa
gaagctttcagaattacagaattgaagttccagcaagaacagagagcacttgaagaaaga
atacatatattgactggaataattactagcaacaatgaagctcatcgaaggatgatagca
gacatctccgaccgtgtgaacagtaccttgacaggactggaaacggtgatcctaaaattt
gaagaagacttcaaaaaatatgaaaattgcatcttggaaatatcaaatgagcttcaaatt
gcgaagaactgggtcatggagactaacaaggagaaagagcaactaaagaaggagctacac
catctagtagagcagctacaagatgagaaagacaaggaatcgtcattgagagagagggtt
gagaagttagaggtcaaggcaagcagggaagaaatagagaaagagaatatgagcaaagca
ttaaaacagcttgagaagacggtcgcagagttagaaaacttgatgaaagaaaaggacgat
ggaatgttgggtcttggggaggagaagagggaggccataaggcagctgtgcgtgtgtatc
gactatcaccgcagtcggtatgatcatctcaaggaaatgctcccaaaggtgactgtcaga
gccagaggacagagggcaagctaa
DBGET
integrated database retrieval system
