Carya illinoinensis (pecan): 122282854
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Entry
122282854 CDS
T08745
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122282854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122282854
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122282854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_25
AAA_28
RsgA_GTPase
nSTAND3
DO-GTPase2
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
122282854
NCBI-ProteinID:
XP_042950845
LinkDB
All DBs
Position
1:complement(51793925..51801702)
Genome browser
AA seq
1457 aa
AA seq
DB search
MDTSDIYRASGSLRLRNSSVWRNNAADVFSMSSREEDDEEALKWAALEKLPTFDRLRKGI
LTTSRGEAIEVDLQNIGLEERKKLLERLVKLAEEDNEKFLFKVRNRIDRVGIDLPTIEVR
FEHVNVEAEALVGSRALPTFFNFSVNILEGFLSFFHIFSSQKKHLSILKDVTGVIKPRRM
TLLLGPPSSGKTTLLLALAGKLDPTLKFSGRVTYNGHDMREFVPPRTAAYISQYDLHIGE
MTVRETLAFSARCQGVGSRYDMLAELSRREKEANIKPDPDVDIYMKAATTEGQEADVATD
YILKVLGLEVCADTMVGDEMLRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTF
QIVNSLRQYVHILDGTAVISLLQPAPETYDLFDDIILLSDGYIVYQGPRENVLEFFESMG
FKCPDRKGVADFLQEVTSRKDQEQYWARRDAPYSFVTVREFAEAFQSFHVGRRIGDELST
PYDKTKSHPAALTTKTYGVSKKELLKASFAREYLLMKRNSFVYVFKLSQLFLMALIAMTI
FLRTKMPRRDSTDGTIYLGALFYTVVMIMFNGMSELSMTIIKLPVFYKQRDLLFYPSWVY
ALPTWILKIPITFLEVAVWVFMTYYVIGFDPNVGRLFRQYFLLVLVNQMASALFRFIAAM
GRNMIIANTFGSFALLLLFALGGFILSREDVKKWWIWGYWISPLMYGQNAILVNEFLGNN
WKKVLLNTNTNTSEPLGVTVMKSRGFFPQAYWYWIGVGASFGFIILFNIGFTFSLAYLNP
FGKSQAVKSDEPESDEQGSSTGEGVELTRRESSSSHHRRTTGSGRDSRRGSNSTRSSFAI
EASRNGKRGMVLPFEQHSITFDDIIYSVDMPQEMMEQGVIEDKLVLLKGVSGAFRPGVLT
ALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKKQETFARISGYCEQNDIHSPHVT
VYESLVYSAWLRLSSDVDSETRKMFIEEVMELVELNPLRNALVGLPGVNGLSTEQRKRLT
IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE
LFLMKRGGQEIYVGPLGHHSSHLIKYFENIEGVRKIKDGYNPATWMLEVTTPSEELALGV
DFTNLYKNSDLYRRNKALIKELSKPAPASKDLYFPTQFSQSFSTQCMACLWKQRLSYWRN
PPYTAVRFLFTVFIALTFGTMFWDLGSKTKKTIDLFNAMGSMYCAVLFLGVQNASSVQPV
VAVERTVFYRERAAGMYSALPYAFGQVAIELPYVFMQAAVYGIIVYAMIGFEWTVAKFFW
YMFFMYFTLLYFTFYGMMSVAFTPNHHIAAIVSSAFYAVWNLFSGFIVPRTRIPIWWRWY
YWACPVAWTLYGLVVSQFGDIQETLEDNGQTVEQYLRSYLGFRHDFLGVVAVVVAGFAVL
FGFIFAFSIKAFNFQRR
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggataccagtgacatttacagggcctctggtagtttacgattacggaattcgtcggta
tggaggaataatgctgcggacgttttctcgatgtcttcgcgagaagaagatgatgaagaa
gctctcaaatgggctgccctcgagaagcttcctacttttgatcgactaagaaaaggtata
ctaaccacttcaagaggtgaggccattgaagtcgatttacagaatatcggattagaagaa
aggaagaaactgcttgagaggttggtgaaattagccgaagaggataatgagaagttcttg
ttcaaggtcaggaatcggatagatagagttgggattgatcttccaacaatcgaagtccgg
tttgagcacgtgaatgttgaggcagaggctcttgtaggaagcagagctttgcctacgttc
tttaacttctctgtcaatatactggaggggttcttgagtttcttccatattttttcaagt
caaaagaaacatttgtctatcctcaaagatgttactggagtcataaagcctaggagaatg
actttgcttttgggtcctccaagttctgggaagacaacactcttactagctctggctgga
aagcttgacccaactctaaagttttctgggagggtgacttataacggccacgacatgaga
gagtttgtacctccgagaactgcggcttatatcagtcaatatgatctccatataggagaa
atgactgtaagggaaaccttggccttctcagcaaggtgccaaggggtcgggtcacgctat
gatatgctagcagagttgtctagaagagaaaaagaggcaaatatcaaaccagatccagat
gtcgatatctacatgaaggctgcaacaactgaaggccaggaggctgatgtggcgacagat
tatatattgaaggttttgggtttagaagtgtgtgctgataccatggtaggagatgaaatg
ttgaggggtatctcgggtggtcaaaggaagcgtgttacgacaggggaaatgctggtcgga
ccagcaaaggcattgtttatggacgaaatatctaccggattggacagctcgacaactttc
caaattgttaattcgctcaggcagtatgttcacattctggatgggacagcagtcatctct
ctactgcagccagcaccggagacttacgatctttttgatgacattattctcctctctgat
ggctatattgtgtaccagggaccccgtgaaaacgttctcgagttttttgaatccatggga
tttaaatgtcctgacaggaaaggtgtggctgactttctgcaagaggtgacatcaaggaag
gatcaggagcagtattgggcacgcagagatgcgccttacagttttgtcacagtaagggaa
tttgctgaggcattccaatcattccatgtgggaagaagaataggagatgaactttcaact
ccatatgacaagacaaaaagtcacccagctgccttgacaaccaaaacgtatggtgttagt
aagaaggaactgttaaaagcttccttcgcaagagaatacttactgatgaagaggaattcg
tttgtttacgtcttcaagctatcacaacttttccttatggcactgattgcaatgacaatt
ttcctacggacgaagatgcctcgtcgtgattcaaccgatggaacaatctatttgggtgct
ttgttttacacagtggttatgattatgtttaatggaatgtcagagttgtccatgaccatt
ataaagcttcctgttttttacaagcaaagggacctcctcttctatccttcatgggtatat
gctcttccaacatggatccttaaaatcccaataacctttttggaagttgctgtctgggtc
ttcatgacctactatgtcattggatttgatccaaatgtcgggaggttgtttaggcaatac
tttttgctagtactcgtgaaccagatggcctctgcactcttccgatttattgcagcaatg
ggtaggaacatgattattgctaatacttttgggtcatttgcactgctcttgctctttgcc
ttgggtggctttatcctctccagagaggatgtaaagaaatggtggatatggggttactgg
atatcgcctttgatgtacggccaaaatgcaatattagttaacgagttcctgggaaacaat
tggaaaaaggttctcctaaacacaaacacaaacacaagcgaaccactgggagttacagtg
atgaagtcgcgcgggttcttccctcaagcatattggtattggataggcgtgggagcatcg
tttggattcatcatactattcaacatcggtttcaccttctccctcgcctatcttaaccca
ttcgggaagtcacaggctgtaaaatcagacgaacctgaaagcgatgaacaggggagtagt
acaggagaaggcgtagagttaacacgcagagaaagcagctcaagtcatcatcgtagaact
acagggagtggacgtgacagtaggaggggaagtaactccaccaggtcatcctttgcaatt
gaggctagtcgtaacggaaaaagaggaatggtccttccatttgaacagcattcaatcacc
tttgatgacattatatattctgtagacatgccacaggaaatgatggagcagggtgtcatt
gaggataaattggtgcttctgaagggtgtgagtggggctttcaggccaggtgttctcaca
gctctgatgggtgtaagcggtgctggtaaaacaactctaatggatgtactggctggtagg
aaaactggtggatatattgaggggagcatcacaatttcggggtacccaaagaagcaagaa
acgtttgctcgaatttctgggtactgtgagcaaaatgacattcattctcctcatgttact
gtgtacgagtccttggtctattcagcatggctccgcttgtcctctgatgttgattcggaa
acaagaaagatgtttattgaggaagtcatggagcttgtggagctgaacccattgaggaat
gcactagttgggttgcccggtgtgaatggtctttctaccgagcagcgcaagaggctcact
attgcagtcgagcttgtggctaacccctccataatatttatggatgagccaacttcaggt
ctagatgcaagagctgctgcaattgtcatgagaacggttaggaacacggtagacacagga
agaactgttgtgtgcacaatccatcagccaagcattgacatatttgaagcttttgatgag
cttttcctaatgaagcgtggaggacaagagatatacgttgggccgttgggtcaccactct
agccatcttatcaagtattttgagaacattgaaggagtcagaaaaattaaagatggctat
aatccagcaacttggatgttggaagttacgactccatcggaagaacttgctttgggtgta
gactttaccaatttgtacaaaaactcggatctatacaggaggaacaaagcattgattaaa
gagttgagcaagcctgctccagcttcaaaggatctctatttcccgactcagttttcacag
tcattttcgactcagtgcatggcttgcctatggaaacaacgcttgtcttattggcgtaac
ccaccatatactgccgtgagatttctcttcacagtattcatagccttgacatttgggaca
atgttctgggaccttggctccaagacgaagaagacaatagatttatttaatgcgatgggt
tccatgtattgtgctgttctcttccttggtgtccaaaacgcttcatctgtgcaacctgtt
gtggctgttgaacgaactgtcttctacagagaaagagctgctggaatgtattcagccttg
ccttatgcatttggacaggttgcaattgagctcccatatgttttcatgcaagctgcagta
tatggcattatagtttacgcaatgattggattcgaatggaccgtagccaaattcttttgg
tatatgtttttcatgtacttcacattgctctacttcaccttctatggcatgatgagcgtg
gcttttacaccaaaccaccatattgctgccatagtatcctcagcattctatgccgtatgg
aacctgttttcaggattcatcgtcccacgaactaggatcccaatatggtggagatggtat
tactgggcatgcccagttgcttggactttgtatggactagttgtatcacaatttggagat
atacaagagacactcgaggacaatggtcaaaccgtggaacaatatttgagaagttatctg
ggattcaggcatgattttctgggagtcgtggcagttgtggttgctgggtttgcagtgctc
tttggattcatctttgccttctccatcaaggcatttaatttccaaaggcgatag
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integrated database retrieval system
