KEGG   Carya illinoinensis (pecan): 122282921
Entry
122282921         CDS       T08745                                 
Name
(RefSeq) brassinosteroid-responsive RING protein 1-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122282921
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122282921
SSDB
Motif
Pfam: zf-RING_2 zf-RING_5 zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-RING_16 Prok-RING_1 RINGv Rad50_zn_hook zf-RING_Vps41 Prok-RING_4 zf-RING_6 zf-RING_4 zf_RING_Vps8_fungal zf-RING-like Rtf2 zf-RING_15 zf_RING_Vps8 RH_dom
Other DBs
NCBI-GeneID: 122282921
NCBI-ProteinID: XP_042950931
LinkDB
Position
11:36416428..36417276
AA seq 164 aa
MGFPVGYTELLLPKLFLHTLSVLGFLRKFISTLFRYLGLGDFLEHDISWPDTPARIPEFH
SVSAVLIREILPVVRFSELVDPPDSCAVCLYEFESEDEIRRLTNCRHIFHKGCLDRWMGY
EQKTCPLCRTPFIPDDMQGTINERLWAASGIPEFYGDYSHLTGW
NT seq 495 nt   +upstreamnt  +downstreamnt
atgggttttccggtgggctacacggagcttctcctcccgaagctctttctccacacgctt
tcggttctgggtttcctcagaaagtttatctccaccctgtttcgctatctgggtctcggg
gactttctggagcatgacatttcgtggcctgacacgcctgcccgaatccctgaattccac
tccgtgtcggctgttctgatccgggaaatccttccggtggtgaggttctcggagctggtg
gacccgccggattcctgcgccgtctgcctgtacgagttcgagtccgaggacgagatccga
aggctcaccaactgccgccacatcttccacaagggctgcctcgaccgttggatggggtac
gagcagaagacgtgccctctgtgccgaacaccctttattccggacgatatgcaaggaact
attaacgagaggctctgggctgcttctgggatccctgaattttacggcgactattcccat
cttactggttggtag

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