Carya illinoinensis (pecan): 122282971
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Entry
122282971 CDS
T08745
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122282971
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Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
Motif
Other DBs
NCBI-GeneID:
122282971
NCBI-ProteinID:
XP_042951003
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Position
11:42066830..42069340
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AA seq
612 aa
AA seq
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MPEAPNCSLKPTNYNLLENNKKTLQFIEDVTANADEVQKRILSEILSRNANVEYLQRHGL
KGHTDRDTFKKVMPVITYEDIQSDITRIANGDTSPILCSRPISEFLTSSGTSGGERKLMP
TIEEELGRRSQLYSLLMPVMSQFVAGLEKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKS
SHFKERQYDPYTNYTSPNETILCPDSYQSMYTQLLCGLCHNKEVIRVGAVFASGFIRAIR
FLEKHWASLCNDIRTGNINPQITDPSVREAVMKILKPDPKLADFIEVECSKDSWQGIITR
LWPNTKYVDVIVTGTMSQYIPTLDHYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYT
LIPTMCYFEFLPIHRNNGVTNSPSVPKSLSEKEQKELVDLVDVKLGQEYELVVTTYSGLY
RYRVGDVLRVAGFKNKVPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLMPFDATL
AEYTSHAETSTIPGHYVLFWELSLNGSTPIPPSVFEDCCLTIEESFNSVYRQGRVSDKSI
GPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKFAPIVELLNSRVLSNYFSPKCPK
WVPGHRQWNNQD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggctccaaactgctcattgaaacccacaaactacaatcttctagagaacaac
aagaagactcttcagttcatcgaagatgtcacggccaacgctgatgaagttcagaagcgt
attctttccgaaatcctctctcgcaatgctaacgtagagtacttgcaaaggcacggcctc
aaaggtcacactgaccgcgacaccttcaagaaagtcatgcctgtgatcacctacgaggat
atccagtcagatatcactcgtattgccaatggtgacacttccccaatcctctgctcaagg
cccatttcggagttcttgacgagctctgggacatctggtggagagagaaaattgatgccc
accatagaagaagaactagggaggaggtcacagctatatagcctcttgatgcctgtgatg
agccaatttgttgctggcctagagaaaggcaaaggaatgtactttttgttcataaaatca
gaggccaagacacctggaggtcttttggctcgccctgttctaactagctattacaaaagt
tcccacttcaaagaaaggcaatatgacccttacacgaactacaccagcccaaacgaaacc
atcctctgccccgactcctaccaaagcatgtatacgcaactactttgtggcctctgccat
aacaaggaagttataagggttggagctgtttttgcctcgggtttcatccgcgccatccgg
ttcctcgagaagcattgggcctctctttgcaacgatatcagaaccggaaacatcaatccc
caaatcactgacccttctgtccgagaggctgtcatgaagatcctcaaacctgatcccaag
cttgcagatttcattgaagtcgagtgtagcaaagattcttggcaaggaatcataaccagg
ttgtggcccaacaccaagtatgtggatgttattgtgactgggaccatgtcacagtacatt
ccaactcttgatcactatagcaatggcctcccacttgtgtgcaccatgtatgcatcctct
gaatgctacttcggtgtcaaccttaatcctctttgcaagcctagtgaagtttcctacacc
ctcattcccaccatgtgctatttcgaattcctgcccattcacagaaataatggggtcact
aactctccctccgtccccaaatctctcagtgaaaaagaacagaaagagttggtggatcta
gttgatgtcaagcttgggcaagaatatgagcttgttgttaccacttattctggactttat
cgctatagagttggagatgtgctccgagtggccggattcaagaacaaggtccctcagttc
aacttcatatgccggaaaaatgtggtcctcagtattgattctgacaagactgatgaagtt
gagctgcaaaatgcagtaaagaatgcggtgaaccatttgatgccatttgatgcaactctg
gccgaatacactagccatgccgaaacctcaacaatcccaggccactatgtgctattctgg
gagcttagcctcaatgggtcaaccccaattccaccctcggtgtttgaggactgctgcttg
accattgaagagtccttcaacagcgtgtaccgccagggacgtgtctctgacaagtcaatt
ggccccctagagattaagattgttgagcccgggaccttcgataagctcatggattatgcc
attagcttaggggcgtccataaaccagtacaagacccctaggtgtgtgaaatttgcaccc
attgttgagctcttgaactcgagggttctgtcaaactacttcagtcccaaatgtcctaag
tgggttccgggccacaggcaatggaacaatcaggattga
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