Carya illinoinensis (pecan): 122284889
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Entry
122284889 CDS
T08745
Name
(RefSeq) F-box/LRR-repeat protein 2
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122284889
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122284889
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_At1g61320_AtMIF1
LRR_6
F-box_5
F-box-like
F-box
LRR_RPS2
HTH_Mga
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122284889
NCBI-ProteinID:
XP_042951258
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Position
1:complement(52775062..52777101)
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AA seq
581 aa
AA seq
DB search
MSEKTPVHLPEECWELVFSFVDHHRHFESLSLVCRQFLAISNQLRVILTVTDQTILFLPR
LLRRFRRLRKIELRDFHGDLEGLLNQIAISGLESLDLEALHLSNQKNLPLDGLRELGSNM
KNLRSLNCSKIGLLQDIHLFTIASSFPNLEELDISYPEHKDCYSSNELDNFGRISGPVTD
LGVSALTLKLKNLIKIDLSGNQFITNQSLIALSSNCTLIREIAVRDCTCITPNAIAFAIR
YSRELRSISVNEIGLPSMEVGFVESFLYAKALGDIDLSNSFVPDELLYSIVEACLPLNKL
TLAHCHGFTFAGFSLLLKKYRSLSLLNLEGVSFLTDQNIMELSDSFSKLTSINLSKCSKL
TNSTFFTIMKMCHLLNEVKMERTNIGKEDLTTDFVVNPRVKALNLAQNGKLGNESIKTLV
TVCPSLQVLDLSSCWEITGESISEIFKSCREIRHLEINQCRGIKEFMIDFELSELEELSA
KGSGINDDALAMIGKRSCRLRRLELAGCLSVTDKGVKQVLKNCRGLREINLKWCDNVNIE
IAWMVFSRPSLRKITLPSGGFLSTERLRNLFLRHGCFVGED
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaacccccgtacatcttcccgaagaatgttgggaactcgtgttctctttc
gtcgaccaccatcgtcacttcgaatcgctatctttggtctgcaggcagttccttgccatc
tccaatcaacttcgagtcatcctcactgtcaccgaccagacaattcttttccttcctcga
ctcctgcgaagattccgtcgtctccgcaagatagaacttcgtgactttcatggagacctc
gaaggccttcttaatcagattgcaatatccgggttggaatcgttggacctagaagctctc
catctttccaatcagaagaatcttcccctcgatgggttgagagaattgggttcgaatatg
aagaacttgagaagtctgaattgctccaagataggcttattgcaggacatccatctgttt
actatagcatcatcgtttccaaatctggaagaacttgatattagctatcctgagcataaa
gattgctactcctcaaatgagctggataatttcgggagaatttcggggcctgtgactgac
ttgggggtttctgccttgacattgaagcttaagaacctgatcaagatcgacctttcaggt
aaccagttcattaccaatcaatcactaatcgctctgtcatccaattgtaccttaatcaga
gaaatcgcggtccgagactgcacttgcataaccccaaatgctattgctttcgcgattcgt
tatagtcgtgaattgaggtccatatcggtaaatgaaatcgggttgccttcaatggaggtt
ggtttcgtagaatcttttctatacgctaaagctttgggagatattgatttgtcaaactca
tttgttccggatgaactgctttattcaattgtagaagcatgtctcccactaaataagctc
actcttgcccattgccacggtttcacgtttgccggcttctctttgctgttgaaaaagtac
cggagtcttagtttgttaaaccttgaaggagtaagttttctcacagaccagaacataatg
gagttatccgactctttctccaagttaacctcaataaatctcagtaaatgttctaagctc
acaaattcgaccttctttaccatcatgaaaatgtgtcatctactgaatgaagtcaaaatg
gagagaacaaatatagggaaggaagatcttactacggattttgtggtgaaccctcgcgtc
aaggctctaaacttggctcaaaatggtaaattaggaaatgagagtatcaaaactttggtt
actgtttgccctagtttacaagtcctcgacctaagttcttgttgggaaatcacaggagaa
agcatttcagaaatttttaagagttgcagggagatcaggcatttggagataaaccaatgt
agagggattaaggagttcatgatagacttcgaactctccgagttggaggaactaagtgca
aaaggatcagggattaatgatgatgctttggctatgatcggaaagagaagttgcaggcta
cgacgtttggaattggcgggctgcctgagtgtgacggataaaggggtgaagcaagtactg
aagaactgcagaggattaagggagataaatctgaaatggtgcgataatgtgaatatagag
attgcgtggatggtgttttcaaggccatcattaagaaaaataactctgccttctggtggt
tttctttctaccgaaaggctaaggaatctgttcttgcgtcacggctgttttgttggggag
gactag
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