KEGG   Carya illinoinensis (pecan): 122285437
Entry
122285437         CDS       T08745                                 
Name
(RefSeq) ABC transporter C family member 13 isoform X1
  KO
K05674  ATP-binding cassette, subfamily C (CFTR/MRP), member 10
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cill00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    122285437
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cill02000]
    122285437
Transporters [BR:cill02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    122285437
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N MMR_HSR1 Dynamin_N AAA_29 RsgA_GTPase AAA_16 nSTAND1 AAA_23 AIG1 ATP-synt_ab DUF5693
Other DBs
NCBI-GeneID: 122285437
NCBI-ProteinID: XP_042951294
LinkDB
Position
1:complement(53009257..53046909)
AA seq 1468 aa
MDAFMALICPNSPSVWDGNRTSECFDNMVLGFGVNAATLVMIFVVGITQRSAGRSWTIAQ
VNMQEKFFLHYFPAIGACLSFLDLALLLNKALHGDFIVHHKWFLRCSQFAVWTTILFFSM
SANYRSIFCNFILCFWWIVRPLLGIFNLLATCSSFETLRCLKESSIVLLDIVFGISINII
RIKRSPSKSSSLEESLLSTDMDLEEGCLKNSGNTQSYWDLMTFKSITSVMNCGAEKQLDF
EDLLQFPADMDPSSCHNALLSSWQDQQIRNISNPSLFRAICCAYGWPYVRLGFLKVFNDC
IGFAGPLLLNKLIRFLQQGSGNLDGYVLAMSLGLTSVLKSFFDTQYTFHLSNLKLKMRSI
IMIVIYRKCLCISLAERSKFSEGEIQTFMSIDADRTVNLCNSFHDLWSLPLQIGVALCLL
YTQVRFAFVSGIAITILLIPVNKWISKLIASATEKMMKQKDERIRKTGEVLTYIRTLKMY
GWELLFSSRLMDTRSSEVKHLTTRKYLDAWCVFFWATTPTLFSLFTFGLFTLMGHPLDAA
TVFTCLALFNTLISPLNSFPWVINGLIDAIISTRRLSRFLSCSEFKPGLEQTADSPSPSF
LNEQSEATSKDAAIAMRDACCAWSSSDEKEWNMVLNHVTLNLPKGCFVAVIGEVGSGKSS
LLNSILGEMRLLHGSIQSIGSIAYVPQVPWILSGTIRDNILFGENYDPRRYSDTLKACTL
DVDVSLMVGGDMAYIGEKGVNISGGQRARLALARAIYHGSNIFMLDDILSAVDAQVAQWI
LNNAILGPLMKQHTRVLCTHNVQAISSADLVVEMEKGHVKWVGSSADLSVSSYSAFSPLN
ECNTYLHIQQEGSMATNNEIEQDLLLEKDATHVSEEAQKIIETELRKEGSVELDVYKNYA
AFSGWLITVVICLSAILMQASRNGNDLWLSFWVDTKTGSSQTEYSTSFYLVILFIFSMIN
SFLTLVRAFSFAFGGLQAAVKVHDTLLYTLINAPVQFFDQTPGGRILNRFSSDLYTIDDS
LPFILNILLANFVGLLGIAIVLSYVQVLFLLLLLPFWYIYSKLQFFYRSTSRELRRLDSV
SRSPIYASFTETLDGSSTIRGFKSEDFFLATFTRHVALYQQTSYTELTASLWLSLRLQLL
AAVIISFIALMAVIGSHGGLPVSLGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVS
VERTLQYMDIPQEELHGSQSLNPDWPCRGLIEFKKVTLRYMPSLPAALCDITFTIGEGMQ
VGIIGRTGAGKSSVLNALFRLTPICGGCILVDGINIADVPVRDLRSHFSVVPQSPFLFDG
SIRDNLDPFRVNEDFKIWKVLEKCHVKDEVEAAGGLDVCMKESGMSFSVGQRQLLCLARA
LLKSTKVLCLDECTANVDAQTASAIQNAMSTECRGVTVITIAHRISMVVNVDNILILDNG
NLVEQGNPQALLQDEFSRFSSFAKASTM
NT seq 4407 nt   +upstreamnt  +downstreamnt
atggacgccttcatggcccttatttgccctaattccccttccgtttgggatggaaatcga
acgtccgagtgtttcgataacatggttttaggtttcggagtgaatgctgctactcttgtt
atgatttttgtggttggaattactcagaggagtgccggacgaagttggacgattgctcag
gtaaacatgcaagaaaaatttttcttgcattattttcctgccattggagcttgtttgtca
tttttggatctggctttacttttaaacaaagcactgcatggagactttattgttcatcac
aagtggtttctcagatgctctcagtttgctgtctggacaactatcttattcttctcaatg
tctgccaactatcggtccatattttgcaacttcatcctatgcttctggtggatagtgagg
ccactattgggcatctttaatcttctagcaacatgttcttcatttgagactttgagatgt
cttaaagagagcagtatcgttttgttggatattgtctttggcatatccattaacattatc
agaataaagcggtcgccttccaagagcagttcattagaagagtcgcttctttccactgac
atggaccttgaggaaggttgcctaaagaattctggaaacacacagagctattgggatctt
atgacattcaaatctatcacttctgtgatgaattgcggtgcggaaaagcagctggacttt
gaagatttgcttcagttccctgctgatatggacccatcttcttgtcataatgcattgcta
agcagttggcaagatcagcagattaggaatatatctaatccatccttgtttagagcaatc
tgttgtgcatatgggtggccatatgttcgcctaggttttttaaaggtgtttaatgattgt
attggttttgctggaccgttgcttctcaataagctgattcgatttcttcaacaaggttct
gggaatttggatggctatgttcttgctatgtccttggggctgacatctgtccttaaatcc
ttttttgacacgcaatacactttccatctttccaatctgaagctaaagatgagatccatt
attatgattgttatctaccgaaagtgtctatgcatcagcctagcagagcgatcaaaattt
tctgagggggaaattcagacattcatgtcaatagacgctgacagaactgtcaacttgtgt
aacagtttccatgacttgtggagcttgcctttgcaaataggagtggctttgtgtcttttg
tatacgcaagtgagattcgcttttgtctcaggaattgcaataaccatcttattgatacca
gtcaataaatggatctctaaattgattgcgagtgctactgaaaaaatgatgaagcaaaag
gatgagaggataaggaagacaggtgaagttttgacatatattcgcacattgaagatgtat
ggctgggagctgcttttttctagccggttgatggatacaagatcttcagaagtgaaacac
ctaactacgcggaagtacttggatgcatggtgtgtattcttttgggccacaacacccact
cttttctcactgttcacattcggactctttacactcatggggcatccacttgatgctgca
acggtcttcacctgtcttgctctgtttaatacgttgatctctcctctaaattcattccca
tgggtcattaatggactcattgatgcaattatatctaccaggcggttgagcaggttcctc
tcttgctctgagttcaaacctgggttggaacagacagcagattcaccttcaccaagtttt
ctgaatgaacagtctgaagctacttctaaagatgcggctattgctatgcgtgatgcatgt
tgtgcttggtcaagtagtgatgaaaaagaatggaatatggtgttgaatcatgtgactcta
aacctcccgaagggttgctttgttgcagttattggagaggttggttctggtaaatcatcc
ttattaaattcgattttgggagagatgcggctgcttcatggatcaatacagtcaattgga
tctatagcatatgtaccacaggtaccatggattctatctggaactatacgtgataatatt
ttgtttggagagaattatgatcctagaagatactcagatactttaaaggcatgcacactg
gatgttgatgtttcattaatggttggaggagacatggcttatattggagaaaaaggagtc
aacatatcaggtggacagagagctcgtcttgctttggccagggctatttatcatggctcc
aatatttttatgcttgatgacatcctcagtgccgtcgatgctcaggttgctcaatggatt
ttaaataatgctatcttgggtcctcttatgaagcaacatacgcgtgtactttgtacccat
aatgttcaggcaatatcatctgcggatttggttgttgaaatggaaaaaggacatgtgaag
tgggtgggaagttcagctgacttgtctgtctcttcatattcagcattctctccgctaaat
gaatgcaacacatatttgcacattcaacaagaaggcagcatggctacaaacaatgaaatt
gaacaagatctcctccttgaaaaagatgccacccatgtttcagaggaagcacaaaagatc
attgaaactgagctacgaaaagagggcagtgttgaacttgatgtatacaagaattatgct
gcattttctggttggcttattactgttgtaatatgcttgtcagcaattttaatgcaagct
tctcgtaatggaaatgatctatggctgtcattttgggttgatacaaagacaggaagtagt
cagacagaatactcaacctcgttttatctggtcatactcttcatcttttctatgataaat
tcctttcttacattggtgagggcattctcatttgcatttgggggcttacaagctgcagtg
aaggtgcatgacacactgctttatacgcttatcaatgcgcctgtccaattctttgatcag
acacccggcggaaggatactcaacaggttctcttctgatctctacacaattgatgactcc
cttccattcattctcaatattctcctagccaattttgttggcctgctgggaattgctata
gttttgtcatatgtacaggttctcttcttgctcttgctgttgccattttggtatatctac
agcaagcttcagtttttctacaggtccacatcacgggaactgcgaaggctggacagtgtt
tctcgatctcccatatatgcatccttcacagagacacttgatgggtcgtcaactataagg
ggattcaagtctgaggactttttcttggccaccttcactcgacatgttgccttgtatcag
caaacttcttacacagaattgacagcaagtttgtggctttctctacggcttcagttgtta
gcagcagttatcatctcatttattgccctgatggctgttattggatctcatggtggttta
cctgttagtttgggcaccccagggctggtaggactggctctctcctatgcagctccaata
gtgtctttgttggggagctttttaacaagttttactgaaacagagaaggaaatggtttct
gttgaaagaactcttcagtatatggatattcctcaagaagaactgcatggatcccaatct
ctcaatccggattggccgtgtcgaggactgattgaatttaaaaaggttactttgagatac
atgccatctttgcctgctgcactttgtgatattacttttacaattggggaagggatgcag
gttggaatcattggcagaacaggtgctggaaaatccagtgtcttgaatgcccttttccgc
cttactccaatatgtggtggatgtattctggtggatggaataaacatagctgatgttcct
gttagagacctccgttcacatttctctgttgttcctcagagtccattcttatttgacgga
tcaataagggataatctagatccattccgggtgaacgaagacttcaaaatttggaaggtt
ttggagaaatgccatgtcaaggatgaagtagaagcagcgggagggctagatgtttgcatg
aaggaatctgggatgtccttttctgttgggcaacggcagctgctttgccttgctcgtgca
cttctcaagtctacaaaggtattgtgtttggatgagtgcacggctaatgttgacgctcaa
acagcatcagcaatacaaaatgcgatgtccactgaatgcagaggcgtgacagtgattaca
attgcccaccgcatttcaatggttgtgaacgtggacaacattctgattcttgacaatggg
aacctggtcgaacagggtaacccccaggctctactacaagacgagttctccagattttca
agttttgctaaggcttctacaatgtga

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