Carya illinoinensis (pecan): 122288285
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Entry
122288285 CDS
T08745
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122288285
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122288285
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122288285
NCBI-ProteinID:
XP_042951488
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Position
1:54101575..54105655
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AA seq
493 aa
AA seq
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MLLLTTCILLICSLSTSLSFLANATPNLTLPHQHPDPEAVVQEVQRRVNASLSQRQMLSL
QAKDQNSACLTGNPIDDCWRCDADWQNNRQRLADCAIGFGHNALGGKGGQFYVVTDSSDS
DPANPVPGTLRHAVIQEEPLWIIFAADMGIKLKHELIFNSYKTIDGRGVNVHIVGNGCIT
LQYVSNVIIHNVHIHHCKPSGNAKIRSSPTQAGWRGRSDGDGISIFSARQIWIDHCSLSY
CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHNDRYALDSGMQVTIAFNHFGEALVQRM
PRCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPGDPNAKEVTKRVETDEREW
TDWNWRTEGDIMVNGAFFVPSGAGASFQYAKASSVEPKAAGLIDQLTMNAGVFGGPREGS
DTPSTSTPGFNTGGTTYSDNNRGSGGGGDFFGMIFGSAAAPPPPTLSSTTSILLSLLIII
LISYTTTNRHLLL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcttaccacctgcattctcttaatatgttctctctccacctctctgtccttc
ctcgccaacgcgacacccaatctgacgctccctcaccaacaccccgatcctgaagctgtt
gtccaagaagtccaaaggcgcgtcaatgcctctctctcgcagagacaaatgctctctctc
caagcaaaggaccaaaattccgcatgcctcaccggaaatcccatcgacgattgctggcgc
tgcgacgctgactggcagaacaaccgccaaaggctcgccgactgcgccatcgggttcggt
cacaacgccctcggtggtaaaggtggtcagttctacgtcgtaactgactcgtccgacagc
gacccagcaaatccggtcccgggtaccctccgccacgccgtgatccaagaagaacccctc
tggattatattcgcggcggacatgggcataaaactgaagcacgagctgatcttcaacagc
tacaagaccatcgacggtcgaggcgtgaacgtccacattgtgggcaacgggtgcatcaca
ctgcagtacgtgtccaacgtcatcatccacaacgtccacatccaccactgcaagccgtcg
gggaacgccaagatacggtcgtcaccgacgcaagccggatggaggggaagatctgacggc
gacggaatctccatcttcagtgcgcgacagatatggatagaccactgctccttgtcttac
tgcacggacggattgatcgacgccataatggggtccacggggatcaccatatccaacagt
tacttctcgcatcacgacgaggtgatgctgctgggtcacaacgatcgttacgccttggac
tcgggcatgcaggtaacgatagctttcaatcacttcggtgaggcactggtgcagcgcatg
ccacggtgcagacgcgggtatatacacgtggttaacaacgatttcacgcagtgggagatg
tacgccatcggcggtagcgcgaacccgaccattaatagtcagggtaatcgttacacagca
ccgggggacccaaacgcaaaggaggtgacaaagcgggtggagacggacgagagggagtgg
acggactggaactggaggacggagggggacataatggtaaatggagcattctttgtgccg
tcgggggcgggagcaagcttccaatacgccaaggcctcaagtgtggagccgaaggccgct
gggctaattgatcagctcaccatgaacgccggcgtctttggtgggcccagggagggcagc
gacacaccgtcgacatcaactccaggattcaatactggtggcaccacatacagtgacaat
aatagggggtccggtgggggtggtgacttctttggaatgatattcgggagcgcagcagca
ccaccaccgcccacgttatcctcaactacttcaatccttttgtcccttttaattattatt
ttaatttcgtacactaccaccaatcgccatctcctattataa
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