Carya illinoinensis (pecan): 122288301
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Entry
122288301 CDS
T08745
Name
(RefSeq) protein RNA-directed DNA methylation 3 isoform X1
Organism
cill
Carya illinoinensis (pecan)
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Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
Spt5-NGN
KOWx_SPT5
KOW5_SPT5
KOW
Motif
Other DBs
NCBI-GeneID:
122288301
NCBI-ProteinID:
XP_042951489
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All DBs
Position
1:complement(54108599..54118529)
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AA seq
1584 aa
AA seq
DB search
MARKGKEVAGKAPAGKRKRGRDDDKSGSIWKKRNREVLQFFEDVVAEADDTDASDDSDID
NYFMEEEFFSEPNIKRETENAQDIPLVPKEEINEDDFDKIMEERYKTGSDFSTFAGDDYD
NKRSIERNSLIPSAKDPTIWKVKCMVGRERQSAFCLMQKYVDLKLLGSKLQIISAFALDQ
MKGFICIEAEKQCDINEACKGISSIYPTRVMPVPKNEVSHLFSARSKCNEVSEGTWARVK
NGKYRGDLAQIVAVNVARKKATVKLIPRIDLQALAAKYGGGVKLKKNSIPAPRLMSTSEL
EEFRPLIKFKRDRDTDTVFEVLDGLMFKGGYLFKKIPTDSLSCWGVEPSEEELLKFKPSV
NTESDNLEWLSQLYGEQKKKRIVRSDKGGGKGEGSSGSGDVNGFELYDFVCFGRKDFGVI
VGMEKDDSYKILKEGLAGPDVVTIQLPELKSGPFDTKFTALDQRMKPISVTDTIKVLEGP
IKGRQGIVRKIYRGIIFFYDENETENGGYLCAKSHSCEKIKLFTDMSNDKVGGESGPLGF
EDFASSPKSPLSPKMPWQARENSREFNRGDKDGMFSIGQTLRIRVGPLKGYLCRVLALRH
SDVTVKLDSQHKVLTVKSEHLSEVRGKSSTISMSENPESSSLEPFNLLGTEGCSRDWMQG
AGTSAGSDGWNSGGLSAGRSSWPSFPASGSALQLESSSANPLEGNDAEKGVENAAWESKV
IPNQSSSWGVVATHEKSSWGASASNGDPSLDTAVINEKSSWGASTANENSSWGAAAANEK
SSWGASTASEKSSWGTAASNDRAVDQIAGWVEGKDAWNKTISKTGFGGSSSNNWDKSVAP
DRDLPGSPKVSGDNWGKGNPKIGILADSSNDAGVTWEKKTASDNQGGERTSGEPWNKGKG
IAANLTSNWGNSTAGKTQLDSWGKSKDPAEAGLWEREKNDWNDRKNMGSGWDQQNSWDQG
KDAVVGERSPWGKPVDSEVKGTASGFREDSWGKAVKNWSTKDGSSGSKTDWKISTPVAEN
QAGDWGNAGGNQTQAGGSWNKPAGGSTWSKYADATLEDESKGKRDQEDCWNRSKSSGGDR
GSSWNKQDGGSWGKPAGGSTWSKQAAASLEDESEGKRDQDDSWNRSKNSSGDQGSGGWNK
GWVENKEDTNGRDSWARPKAFDKDSGFGGRRGRGGGRGGRDQFGRGRSFSQRLSGWNGAQ
ENTSTNDGTSSGNSSGWTNDQAWGSGDTRQMYGGKSSGWNNITTGNNEEDDHKDQWGDWN
KGKTSSDGSARGWNQSSGWKSGSKDGKNDDSNWGRSSWSSGSSDATRNPDSSWGRKSDGN
EDGNQDSNWGKRSNWNSESGDANKDSGWGKKSNWASGNQSIAGGSGDQTESFSERASDGN
YRGGFGARGSSDRGGFRGRGGFGGRGGDRGGFGGRGRERGGFGGRGRSDRGGFGGRSDRG
GFGGRGRGRWDQSGGWNNRNDSSEDKPSDWNQEAGEGWKKNDGVETWNGASDKNKSQSWN
AGSCGTSNQTSGWNSKGWNQPTAAKDAAGSGWNKGSGSSNEAGGSKGNNAGSTEASGGNQ
WSSWDKSTIGTEIKETNQQGEGGW
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagggcaaggaggtggccggaaaggctcccgccggcaaaagaaagcgcggc
agagacgacgacaagtctggatccatttggaagaagaggaatcgcgaggtcctccagttc
ttcgaggacgttgttgccgaggccgacgataccgatgctagcgacgacagtgacatagat
aattattttatggaggaagaatttttttcagagccgaatatcaagagagaaacagagaat
gcccaggacattcctcttgtgcccaaagaggagatcaatgaagatgatttcgataagata
atggaggaacgatataagactggttctgatttctctacatttgctggggacgattatgat
aacaaaagatcaattgaaagaaattctctcataccttctgctaaggatccaaccatctgg
aaagttaaatgcatggttggacgtgagaggcagtcagctttttgtctcatgcagaaatat
gtagacttgaaattattaggttccaaactccagataatttctgcatttgctcttgatcag
atgaagggttttatttgtatcgaagctgagaagcaatgtgacatcaatgaggcatgcaaa
ggcatttctagtatatatcctacccgggtaatgccagtgccaaaaaatgaagtttctcat
ttgttctctgcccgaagtaagtgcaatgaagtttctgagggcacgtgggctcgtgtgaag
aatggaaagtacagaggagacctagcacagattgtagccgtgaacgttgcacggaaaaaa
gcaacagtgaagcttattccaagaattgatctacaagcattggctgcgaaatatggtggg
ggagttaagctcaagaaaaattcaattccggcaccaagattgatgagcacaagtgaactt
gaggagtttcggcctctcattaaattcaaacgtgatcgtgacaccgatacagttttcgag
gttctggatggattgatgttcaagggtggatatttgtttaagaaaataccaacagattct
ttaagttgctggggcgttgagccatcagaagaggagctcctgaagtttaaaccttctgtg
aatactgaatctgataatttggagtggctttcacagctttatggtgaacaaaagaaaaag
cggattgtaagaagtgataaagggggtggaaaaggagagggctcttcaggatctggtgat
gtgaatggttttgaactgtatgattttgtttgttttgggcgtaaagattttggtgttatc
gtaggcatggagaaagatgattcttacaagattttgaaagaggggttagcaggacctgat
gtggtgactattcagcttcctgagttaaagagtgggccttttgatacgaaattcactgct
ttggatcagcgcatgaagcccatatctgtcactgatactataaaggttttggaaggacca
ataaagggtaggcaagggattgttaggaaaatctacagaggcataatctttttctatgat
gagaatgagacagaaaatggtggttatctctgtgctaaatcccactcgtgtgagaaaatc
aagttattcactgatatgtctaatgacaaggttggtggtgaatcgggtccattgggtttt
gaggacttcgcatcatctcctaaatcacctctttctccgaaaatgccatggcaagctagg
gaaaatagtcgtgaattcaatcgtggggataaagatggaatgttctctattggtcaaacc
ttgagaatccgtgttggtcctctaaagggatacctctgccgtgttttagctttacgtcat
tctgatgttacagtcaagttggattcacagcacaaggttcttacagttaaaagcgagcat
ctttctgaggttcgaggaaagagctctaccatatctatgagtgagaatccagagtccagt
tctttagagccatttaatcttcttggaaccgaaggctgctccagagattggatgcaggga
gcaggaacatcagcagggagtgatgggtggaattctggggggctgtctgctggaaggagc
tcttggcctagcttccctgcctctgggtcagcgcttcagctggagtccagttctgcgaat
cctttagagggtaatgatgccgaaaaaggtgtggaaaatgctgcttgggagagcaaagtg
attcctaatcaaagttcatcctggggtgttgtggcaactcatgaaaagtcatcttggggt
gcttcagcatctaatggagatccatccttggatactgcagttattaatgaaaaatcatcc
tggggtgcttccacagctaatgaaaattcatcgtggggtgctgcagctgctaatgaaaaa
tcatcctggggtgcttccacagctagtgaaaaatcttcttggggtactgcagcttccaat
gatagggctgttgatcaaattgcaggctgggtagagggcaaagatgcttggaacaaaact
atttcaaaaactggatttgggggcagttcatctaacaactgggataaatcagtagcacct
gacagagatctgccaggctctccaaaagtttctggagacaattggggcaaaggaaacccc
aaaattggaattctggctgattcttcaaatgatgctggtgtcacctgggagaaaaaaact
gcatctgataatcagggtggtgagagaacatcaggggaaccatggaataaaggtaagggt
attgctgcaaatctgaccagcaattggggtaattcgactgctggaaagactcaactggat
tcttggggcaaaagtaaagatccagctgaagctggattgtgggaaagggaaaagaacgat
tggaatgacaggaaaaatatgggatctggctgggatcaacagaactcatgggaccaaggc
aaagatgcagttgtcggtgagcgatctccttggggaaaacctgtggacagtgaagttaaa
ggcaccgcttctggatttcgagaagattcttggggcaaggctgttaaaaactggagcact
aaggatggatcaagtggaagcaagactgactggaaaatctcgacgcctgtggctgagaat
caggctggggattggggtaatgctggtgggaatcagacccaagctggaggttcttggaat
aaaccagccggagggtcaacgtggagtaaatacgctgatgcaactttggaagatgaatct
aaaggcaagagggatcaagaagactgttggaatagatccaaaagttctggtggggatcga
ggttcttcttggaataaacaagatggaggttcctggggtaaaccagctggggggtcgaca
tggagtaaacaagctgctgcaagtttggaagatgaatctgaaggcaaaagggatcaagat
gactcttggaatagatccaaaaattccagcggggatcaaggttctggtggttggaacaaa
gggtgggtggaaaataaagaggatacaaacgggcgagatagctgggcgaggccaaaagca
tttgataaggatagtgggtttggtgggagaagggggagaggaggtggccggggaggtaga
gatcaatttggcaggggaagatcattcagtcagcgactttctggttggaacggagctcaa
gaaaacacaagtacaaatgatgggacatcctcaggaaattcgtctgggtggaccaatgac
caagcatggggcagtggggatactcgccaaatgtatggaggtaagtcctctggctggaat
aatattactactggaaacaatgaagaggatgaccataaagatcaatggggtgattggaac
aaggggaaaacatcatctgatggttcggcacgtggatggaatcaaagttctggttggaaa
agtggatcaaaggatggaaaaaatgatgattctaattggggcagaagtagttggagctcc
ggatcaagtgatgccactagaaacccggattcaagctggggaagaaaaagtgatgggaat
gaagatgggaaccaagattctaattggggcaaaagaagtaactggaactctgaatctggt
gatgcaaacaaggactcaggctggggcaagaaaagcaattgggcaagtggcaatcagtca
atagctggtggaagtggagaccaaacggagagtttcagtgaaagggcaagtgatgggaat
tacagaggaggttttggagctagaggcagttcagacaggggaggctttagaggtagaggg
ggttttggaggcagaggtggagacagggggggttttggtggcagaggcagagaacggggg
ggtttcggaggtagaggtagatcagacagaggaggttttggtggtagatcagaccgagga
ggatttggaggcagaggccgtggaaggtgggatcaaagtggtggttggaataacagaaac
gacagtagtgaggataagccctctgactggaaccaagaggcaggcgagggatggaagaaa
aatgacggtgtagaaacttggaatggagccagtgataagaataaatcgcagagttggaat
gcaggaagctgtggaactagcaatcaaaccagtgggtggaatagcaagggttggaaccag
ccaacagcagctaaagatgctgctggtagtggctggaacaaaggatccggttcaagtaat
gaagctggtggaagcaagggaaacaatgcaggatcaacagaagcctctggcgggaaccag
tggtcaagctgggacaaatcaaccataggcactgagattaaagaaactaatcagcaaggg
gaaggaggttggtaa
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integrated database retrieval system
