Carya illinoinensis (pecan): 122288843
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Entry
122288843 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122288843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122288843
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122288843
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
122288843
NCBI-ProteinID:
XP_042951568
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Position
12:29389376..29396938
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AA seq
681 aa
AA seq
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MASHEQEISRAYSRTHSMTDDDHSDSEEEEQLAEEEEEEDEKKSSSRGDCKNLYFMCGSR
RRGGWSLGQVLDPRARWVQEWNRVFLLVCATGLFVDPLFFYALSISDTCMCLFVDGWFAI
TVTVLRCMTDVLHVWNMWLQLKMANRSSAVAGTTTGLRDTSAGTVALQYLKAKKGFFFDL
FVILPLPQVVLWVAIPSLLERGQVTIVMTVYLIIFLFQYLPKIYHSVCLLRRMQSFSGYI
FGTVWWGIALNLIAYFVASHAAGACWYLLGIQRATKCLKELCRATNGCGLSMLSCKEPIY
YGTTSMVSERARLAWAENKQARSTCLESADNYEYGAYKWTVQIVTNDSRLEKILFPIFWG
LMTLSTFGSLESTTEWLEVAFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRN
IEWWMKKRRLPQGFRQRVRNYERQRWAAMRGVDECEMISNLPVGLRRDIKYHLCLDLVRQ
VPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQVLRDGVKS
CCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTIETTEAFGLEADDVKYVTQHFRYT
FVNEKVKRSARYYSPGWRTWAAVAIQLSWRRYKHRLTLNSLSFIRPRRPVSRCSSMGEDR
LRLYTALLTSPKPDQDDFFDY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctagccatgagcaagaaatctcacgtgcttattcacgcacgcactccatgactgat
gacgaccacagcgatagtgaagaagaagagcaactggctgaagaagaagaggaggaggat
gaaaaaaaaagcagctcgcgtggtgactgtaaaaacttgtatttcatgtgcgggtctcgc
cggaggggaggctggtcactggggcaggtcttggacccgagagccaggtgggttcaagaa
tggaacagggtgttccttctggtttgcgccacggggcttttcgtagaccctcttttcttc
tacgcgctgtccataagcgacacctgcatgtgcctcttcgtagacgggtggttcgccatc
accgtcacagtgctccggtgcatgaccgacgtcttgcatgtctggaacatgtggttacag
ctcaaaatggcaaaccggtcctctgcagtggctggaacgacgactgggctcagggacacc
agtgctggcaccgtggctctccagtacttgaaggccaagaagggctttttctttgatctc
tttgtgattcttcctcttccacaggtggttttatgggtagccattccgtcgctgctggaa
agagggcaagtcaccattgtgatgacagtgtacttgatcatatttcttttccagtatcta
ccgaagatctaccattctgtctgcctcttacgtcgcatgcaaagcttctctggctacatt
tttggaacagtttggtggggaatagccctcaacttgattgcatattttgtagcctcgcat
gcagcgggagcatgttggtacctgctgggaatccaaagagctacaaaatgcctgaaagag
ctatgcagagcaacaaatggttgtgggttaagtatgctatcttgcaaagaacctatttat
tatggaacaacaagcatggtgagcgagagagctagattggcttgggcagagaacaaacag
gctaggtctacttgcttagaaagcgccgataattatgagtatggagcttataaatggact
gttcaaattgttaccaacgatagccgcttggaaaagattctttttcccatcttttggggc
ctaatgactctaagcacttttgggagcttggagagcactacagaatggttagaggttgct
tttaatatcatcgttcttaccagtggactccttttggtcaccatgttgattggaaatatc
aaggtgttcttgcacgcaacaacgtcgaagaaacaagcaatgcaattgaaaatgaggaat
atagagtggtggatgaagaagaggcggttgcctcaggggttcaggcagcgtgttcgtaac
tatgagaggcaacgatgggcggctatgcgtggtgttgatgaatgcgagatgataagcaat
ctccccgttggccttaggagggacatcaagtatcatctctgcttggacttggttagacag
gtgccattgttccagcacatggatgatctggtcctagagaacatatgcgaccgcgtgaag
tccctcatattcaccaagggagaaactattaccagagagggcgatccagttcaaagaatg
ctatttatagtaaggggtcaccttcaaagcagccaagttcttcgagatggcgtcaagagt
tgctgcatgttaggccccggaaacttcagtggggatgagcttctttcctggtgcctcaga
cgaccctttatcgaaaggcttccaccgtcttcatcaacactagtcaccatcgaaaccaca
gaagcatttgggctggaagcggatgatgtgaaatatgtcacgcagcactttcgttacaca
tttgtgaacgagaaggttaagaggagcgccagatattactcgcccggatggagaacatgg
gcggccgtggcaattcaattgtcctggaggaggtataagcaccggttaacgctaaactct
ttgtcatttataaggccgaggaggcccgtctctcggtgttcttccatgggagaggacagg
ctccggctttacacggctttattaacttcgccaaagccagatcaagatgattttttcgac
tattaa
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