Carya illinoinensis (pecan): 122288846
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Entry
122288846 CDS
T08745
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04142
Lysosome biogenesis
cill04145
Phagocytosis
cill04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122288846
04142 Lysosome biogenesis
122288846
04148 Efferocytosis
122288846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122288846
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122288846
Hops complex
122288846
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
TRIM_CC
DUF2753
Motif
Other DBs
NCBI-GeneID:
122288846
NCBI-ProteinID:
XP_042951576
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All DBs
Position
1:54329018..54337112
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AA seq
581 aa
AA seq
DB search
MGSRGCVRFRGIYVLPIRGKKCLIIDPKLGGSLSSIIQTSLLKEHGVELRHLSAEPIQSD
CTKVVFLVRSKIDLMKFICSNVHNDISKGLQREYHVYFVPRRAVVCEKVLEDEKVHQLMT
IGEYPLYVVPLDEDVLSFELDLAYKESQVDGDTSSLWHIAKAIHKLEFSFGVIPNVRAKG
KASVRVADILNHMQAEEPVNSPDMVVPEINTLILLDREVDMVTPMCSQLTYEGLIDEFLH
INNGSVELDASIMGVQQEGKKIKVPLNSSDKLFKEIRDLNFEVVVQILRQKATSMKQDYT
EMTTTTQTVSELKDFVKKLNSLPEITRHINLAQHLSTFTSKPSFLGQLDMEHTIVEAQSY
DICYEYIEEMIHKQEPLVNVLRLLILFSVTNSGLPKKHFDYLRRELLHSYGFEHMATLNN
LEKAGLLKKQETKSNWLTIKRALQLVVDDTDTANPNDIAYVFSGYAPLSIRLIQHAVRSG
WRPIEEILKLLPGPHSETKRGRFSSSPSFDTLQGASANIDRAADGRRSLVLVVFIGGVTF
AEISALRFLTAQEGMAYDMIIGTTKIVSGHNLAETFVEKLG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccgcggctgcgttcggttcagaggaatttatgtattaccgattcgagggaaa
aagtgcttgataatcgatccaaagcttggaggctctctctcatcgatcatccagacgtca
cttctgaaggaacatggggtagaattgcggcatctttcagcggagccaattcaatctgac
tgcaccaaagtggttttccttgtccgttctaagattgatttgatgaaattcatatgttca
aatgttcataatgatatatcaaaagggctccaaagggaataccatgtttattttgtccct
cgccgtgcagttgtatgtgagaaggtccttgaggatgaaaaggttcatcagttgatgact
ataggggagtacccactgtacgtagttccacttgacgaggatgtcttatcatttgaactc
gatcttgcgtacaaagaaagccaagttgatggcgatacaagctcgctttggcacatcgca
aaagccattcacaagcttgagttttctttcggagtgataccaaatgtgagggccaaaggc
aaagcatcagtgcgtgtggcagacatcctaaaccacatgcaagctgaggaaccggttaac
tcacctgatatggttgtgccagagataaatacactcatccttttagatagagaggtggat
atggtcactcctatgtgttctcaattgacatacgaggggctgattgacgagtttctgcat
atcaataatggatccgtggagcttgatgcatcgatcatgggtgtccaacaagagggaaaa
aagataaaagtaccactcaattcaagtgacaagctgtttaaggagataagggatctcaac
ttcgaagttgttgtccagattctacgtcagaaagcaacatccatgaaacaggattacaca
gagatgacaacaactacgcagacggtttctgaattaaaggactttgtcaaaaagctgaac
tcattgccagaaattactagacacataaatcttgctcagcatctgtcgacattcacatca
aagccatcatttcttgggcaacttgacatggaacacacaattgttgaggcacagagctat
gacatatgctatgagtatattgaagaaatgatccataagcaggagcctcttgtcaatgtt
ctacgtcttctcatcttattttccgttacaaactctgggttgcctaagaagcattttgac
tacttgaggagagaattactccacagctatggatttgagcacatggccacgctgaataac
ttagagaaagctggattgctgaaaaaacaggagacaaaaagcaactggctgacaatcaaa
cgcgctctgcaacttgtggttgatgacactgacacagcaaatcccaatgatattgcctat
gtattttctggatatgcacctcttagtattcgtctcattcagcatgccgttcgatctgga
tggcgtcctatagaagaaattctgaagctactaccaggaccacattctgaaacgaaaaga
ggcagattctcaagcagtccatcatttgacacgcttcagggagcttcagccaatatagac
agagctgctgatggtaggcgctccctagttcttgtagtcttcatcggaggtgtaacattt
gcggagatatctgccctcagatttctcactgctcaggaggggatggcatacgatatgatc
attgggacgaccaaaattgtcagtggccataacttagctgaaacatttgtggagaaattg
ggttga
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