KEGG   Carya illinoinensis (pecan): 122288892
Entry
122288892         CDS       T08745                                 
Name
(RefSeq) ras-related protein RABF1 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04144  Endocytosis
cill04145  Phagosome
cill04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122288892
   04145 Phagosome
    122288892
   04148 Efferocytosis
    122288892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122288892
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cill04147]
    122288892
   04031 GTP-binding proteins [BR:cill04031]
    122288892
Membrane trafficking [BR:cill04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    122288892
 Endosome - Lysosome transport
    122288892
Exosome [BR:cill04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122288892
  Exosomal proteins of other body fluids (saliva and urine)
   122288892
  Exosomal proteins of colorectal cancer cells
   122288892
  Exosomal proteins of bladder cancer cells
   122288892
GTP-binding proteins [BR:cill04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    122288892
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 TniB AAA_16
Other DBs
NCBI-GeneID: 122288892
NCBI-ProteinID: XP_042951649
LinkDB
Position
1:complement(54396930..54401388)
AA seq 200 aa
MGCSSSLPDRTPGRLTGTNSENGGVLDPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPES
FIKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVPVQDGIDYAEKNGMFFIETSAKTA
DNINQLFEEIGKRLPRPPSS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcttcctctcttccagataggactcccgggcggttgaccggcacaaattct
gagaatggcggagtgctggacccaaaaaatcttcgcgtgaagctggtattattaggcgac
tctggtgttggtaaaagctgtattgttcttcgctttgttcgcggtcagtttgacccaaca
tccaaggtaactgtcggagcttcattcttatcacagacaatagctttgcaagactccaca
acagttaagtttgaaatatgggacactgctggacaggagagatatgcagcattggcacca
ctttactaccgaggtgctgcagttgcagttattgtgtatgatataactagcccagagtca
ttcatcaaagcacaatattgggttaaggagctacaaaaacatggaagccctgatatagtc
atggccttagttggtaacaaagctgatcttcaggaaaagcgggaagtaccagttcaggat
ggcattgactatgcagagaagaatggaatgttttttattgagacatctgcaaagacagca
gataatataaatcagctgtttgaggaaattgggaagcgattaccccgtccaccctcctct
tga

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