Carya illinoinensis (pecan): 122288997
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Entry
122288997 CDS
T08745
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122288997
Membrane trafficking [BR:
cill04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
122288997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
GCIP_C
MCPsignal
Helo_like_N
DUF1759
Occludin_ELL
DUF948
Syntaxin_2
Prominin
ING
PLU-1
BDV_P24
DUF2203
BLOC1_2
Vps53_N
ANIS5_cation-bd
Laminin_II
PCRF
TMPIT
YkyA
Motif
Other DBs
NCBI-GeneID:
122288997
NCBI-ProteinID:
XP_042951795
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All DBs
Position
12:22863926..22869547
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AA seq
261 aa
AA seq
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MDPLSTISEELAEIDGQIGDIFRALSNGFQKLEKVKDSNRQTRQLEELTEKMRECKRLIK
EFDREVKDLESRNDPGTNKMLNEKKQSMIKELNSYVALKKQYASNLENKRIDLFDGGTEG
HGEENVLLASSMTNQQLVDSGNRMMDDTDQAIERSKKVVHDTLNVGTETAAALKAQTEQM
SRVVNELDSIHFSIKKASQLVKELGRQVATDRCIMALLFLIVIGVVAIIIVKLVNPNNKD
IRDIPGLAPPAMTRRLLWNAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttatctacgatcagcgaagagcttgcggagattgacggacaaatcggcgac
atcttccgagcattatcaaatggatttcagaagttggagaaggttaaggactctaatagg
caaactaggcagttggaagaactcacagaaaagatgcgcgagtgtaagaggcttatcaaa
gagtttgacagagaagtcaaggatctggagagtagaaatgatcctggcactaacaagatg
ctgaatgagaaaaaacagtcaatgatcaaagagttgaattcttatgttgctctcaaaaag
caatatgcatccaatcttgaaaacaagcgaattgatctctttgatgggggtactgaagga
catggggaagaaaatgtcttgctagcttcgtccatgacaaatcaacagctagtagatagt
ggaaaccggatgatggacgatactgatcaagctattgagaggtcaaaaaaggttgttcat
gacactctcaatgttggaactgagactgcagcagccctaaaggctcagactgaacaaatg
agtcgggttgtcaatgagctggattctattcatttctcaatcaagaaagcttctcaactt
gtgaaggaacttggtaggcaggttgcaactgaccggtgtatcatggcattactcttcctt
attgtcattggagtagtagccattattattgttaagcttgtgaacccaaacaacaaggac
atccgggatattcctggtttagccccgccagcgatgactcggagattactttggaatgct
agttaa
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