Carya illinoinensis (pecan): 122289025
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Entry
122289025 CDS
T08745
Name
(RefSeq) transcription factor MYB80
KO
K09422
transcription factor MYB, plant
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122289025
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122289025
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
122289025
NCBI-ProteinID:
XP_042951841
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Position
12:30754802..30756885
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AA seq
346 aa
AA seq
DB search
MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
LRPDLKHGQFTDAEEQTIVKLHSVVGNRWSLIAAQLAGRTDNDVKNHWNTKLKKKLSGMG
IDPVTHKPFSHLMAEIATTLAPPQVAHLAEAALGCFKDEMLHLLTKNRIDFQIQPHPPST
STTTAAPHASAYNININGKHDEKEDTIEKIKLGISRAIQERPHDNMLPSNKPWDSSTANF
AGACSTTAFPASISGGYHHQYGPPSSFANDGNRSPWSQISICTGSTCNAGDQHVRLHEKL
EGGIINGGEDSEGGKEIRNGTSSMFASDCVLWDLPSDHDLMKYPIV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggattccatgttgtgagaaggacaatgtcaaaaggggacagtggacaccggaa
gaagacaacaagctctcttcctacattgcccaacacggcactcgtaactggcgtctcatc
cccaagaatgctggtcttcaaagatgcgggaagagctgcagactaaggtggactaattat
cttcgtcctgatctaaagcatggccaattcaccgatgcagaagagcaaaccatagtgaag
cttcattccgttgttggcaaccgatggtccctaatcgcagctcagctggctggccgcaca
gacaacgatgtaaaaaatcactggaacaccaagctcaaaaagaaactttcgggcatgggt
attgatcccgtcacccacaagcccttttcccacctcatggctgaaattgccaccacactg
gcaccccctcaggtggctcaccttgcagaagcagcccttggctgctttaaagacgaaatg
ctccacctccttaccaagaaccgcattgacttccagatccaacctcatccccccagtact
agtactactactgcagcgccacatgcatctgcttataatattaatatcaacggtaagcat
gatgaaaaagaagacaccatcgagaagatcaagctcggtatatcaagggctatacaagaa
cgtcctcatgacaatatgctaccatcaaacaagccatgggactcttcaactgcaaatttt
gcaggggcctgcagtactactgctttccctgcttctatctctggaggatatcatcatcag
tatggcccaccatcatcttttgcaaatgatgggaaccgatcgccatggagccagatcagt
atctgtacaggaagcacgtgcaatgcaggggaccagcatgttcggttgcatgaaaaacta
gagggaggaattattaatggaggagaggattctgaggggggaaaagaaatcagaaatgga
accagcagtatgttcgcttcagattgtgtcttgtgggatttaccatccgatcatgaccta
atgaaatatccaatcgtttaa
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