Carya illinoinensis (pecan): 122289041
Help
Entry
122289041 CDS
T08745
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00541
Biosynthesis of various nucleotide sugars
cill01100
Metabolic pathways
cill01250
Biosynthesis of nucleotide sugars
Module
cill_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
122289041
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
122289041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
122289041
NCBI-ProteinID:
XP_042951876
LinkDB
All DBs
Position
12:complement(28178921..28182529)
Genome browser
AA seq
673 aa
AA seq
DB search
MANYTPKNILVTGAAGFIASHVVNRLIRNYSDYKIIVLDKLDYCSNIKNLLPSKSSPNMK
FVKGDIASADLVNYLLVAESIDTIMHFAAQTHVDNSFGNSIKFTKSNIAGTHVLLEACKA
TGKIKRFIHVSTDEVYGETDGDAIVGNHEASQLLPTNPYSASKAGAEMLIMAYHRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMQGKHLPIHGDGSHVRSYLYCEDVAEAFEVILH
KGEVGHVYNIGTTEEMRVTDVAKDICKLFSKDPATNIKFVENRPFNDQRYFLDDLKLRKL
GWSARTTWEEGLKKTMEWYVNNPDWWGDVSGALLPHPRMLMMPGQTDRGQLNGPEDGKFA
SHDVSSNTLLRDPSSKRSGFPKKHSLKFLIYGRTGWLGGQLGKLCEKQGIPFEYGRGRLE
DRSSLLADIRNVKPTHVFNAAGLTGKPNADWCESHKAETIRTNVAGALTLAEVCREHGLL
MMHFSSGCIYEYDAAHPEGSGIGFTENDKPNFAGSFFSKTRAMAEELLKEYDNVCILRGR
MAISSDLKHPSNFIIKISRYSKVVNILNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVL
SHNDVLEMYKRYINPEFKWANFTLEEQAKVLASARSNTELDATKLKTEFPELLSIKESLI
KYVFGPNMKNFTE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggccaattataccccaaagaacatcctcgttactggggctgctggtttcattgcatcc
catgttgtcaaccgactcattcgtaactactctgactacaaaatcatcgtgcttgataag
cttgattactgctcaaatattaaaaaccttcttccctctaaatcatctcccaatatgaag
tttgtcaagggggacattgccagtgctgaccttgtcaactacctcctcgtcgccgaatct
attgacaccataatgcactttgcagcccagacccatgttgacaactcgtttggtaacagc
attaagtttaccaaaagcaatatcgcgggtacccatgtccttttagaagcctgcaaggcc
actggcaagatcaagaggttcatccatgtcagcacggacgaggtctatggggagacagat
ggagatgctattgtcggaaaccacgaggcctctcaactcctcccaacaaatccatactct
gcatcaaaagctggagcagaaatgcttattatggcatatcatagatcatatgggttacct
gtgataacgacacgtgggaataatgtttatgggcccaaccagtttcctgagaaattaata
ccaaagttcatcctcttggctatgcaagggaagcatcttccaattcacggcgatgggtct
catgtaaggagttatttatattgcgaggatgttgctgaggcttttgaagtcattcttcat
aagggagaggtaggtcatgtttacaatattgggacaacggaggaaatgagagttactgat
gtggccaaagatatatgcaaacttttctcaaaggacccagcgacaaacatcaagtttgtt
gagaacagaccatttaacgaccaaaggtactttctagatgatctgaagctacgtaaattg
ggatggtctgcgcggactacttgggaagaagggctgaagaagaccatggaatggtacgtc
aacaatcctgattggtggggtgacgtttccggagcactgctacctcatccaagaatgctg
atgatgcctggtcagacagatcggggacaattaaatggtccagaagatggcaagtttgca
tctcatgatgtctcaagtaataccttgttgcgggatccatcttccaaacgaagtggcttt
cctaaaaaacattccttgaagttcttgatctacggtagaactggttggcttggaggtcag
ctaggaaagttatgtgaaaaacaaggaattccatttgaatacggaagagggcgtctagag
gatcggtcatcacttttggcagatattcgtaatgttaagccaacccacgtttttaatgct
gctggtctgactggtaaacctaatgcagattggtgcgagtctcacaaggcagaaacaatt
cgcacgaatgttgctggagccttaaccttagcggaagtttgcagagagcatggactcttg
atgatgcatttttcttcagggtgtatatacgagtatgatgctgcacatcctgaaggatct
ggcattggatttacagagaatgacaaacccaatttcgccggttctttcttttccaaaacc
agggccatggctgaagagttgttgaaagaatatgacaatgtctgcattttaagaggtcgg
atggcaatatcatctgacctaaaacatccgagcaacttcataattaagatttctcgttat
agcaaagtggttaacatcctaaatagcatgactgtcttggatgagcttctacccatttca
attgagatggcaaagcgaaatttgaagggtatatggaacttcacaaaccccggggtattg
agccacaatgatgttctcgagatgtacaagcgatacattaaccctgaattcaagtgggca
aacttcacacttgaagaacaggccaaggtcctcgcatctgctcgaagcaacaccgagttg
gatgcaacgaagttgaaaacagagttccccgagttgctatctatcaaggagtcgctaatt
aaatatgtctttggacccaacatgaaaaacttcacagaataa
DBGET
integrated database retrieval system
