Carya illinoinensis (pecan): 122289101
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Entry
122289101 CDS
T08745
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122289101
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122289101
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122289101
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122289101
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122289101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
122289101
NCBI-ProteinID:
XP_042951973
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All DBs
Position
12:30661884..30664992
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AA seq
310 aa
AA seq
DB search
MGDLRSRFLDVYSVLKSELLHDPAFDFTVDSRQWVERMLDHNVPRGKLNRGLCVIDSYKL
LKEGKELTDDEFFLACALGWCIEWLQAYFRVLDDITDNIPEDAVKRRGQPCWFKQPKVGL
IAANDGTILHNHITRILKKHFREKPYYVDLLDLFNEMEFQTASGKMTDLITSTHVGERDL
STKFSLPLHLRIVQYYKTTYHSPYLSVACALLMSGENLENHISVKNILVEMGIYFQVQDE
YTDCFGAPEVVGKVRYGIILNDSYMTQSGVVAEYESENYGKLVKSIEAHPSKAVQAVLKS
FLTKVCNGHE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttgaggtcgagattcttggacgtgtactctgtgttgaagtctgagctcctc
catgatccggctttcgatttcaccgtcgattcacgccagtgggttgagcggatgctggac
cacaacgtaccaagaggaaagctgaaccgaggactctgtgtcattgacagctacaaattg
ctgaaagaaggaaaggaactaactgatgatgagttttttctcgcgtgtgcgctaggctgg
tgcattgaatggcttcaagcatattttcgtgttcttgacgatatcacagacaatatccca
gaagatgctgttaagcgccgtggtcaaccctgttggtttaagcaacccaaggtcggtttg
attgctgcaaatgatggcacaattctccacaaccacatcacaagaattctcaaaaaacat
tttagagaaaagccttattacgtggatctgctggatttatttaatgagatggaattccag
accgcgtcagggaaaatgacagatttaattaccagtacgcatgtaggagagagagatcta
tctactaagttctcactgcctctccacctacgcattgttcagtactacaaaaccacttat
cattcaccctacctttcagttgcttgtgcattgctcatgtctggagaaaatcttgaaaat
catattagtgtgaagaacattctggtcgaaatgggaatttattttcaagtacaggatgag
tacacggattgttttggtgctcctgaagtggtcggtaaggtgcgttatgggataatactc
aatgactcgtatatgactcaatcaggtgtggttgcggagtacgagagtgagaattacggg
aagcttgtcaaatccattgaagcccatccaagtaaagcagtacaagctgtgttaaaatca
ttcttgacaaaagtttgtaatggacacgagtga
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