Carya illinoinensis (pecan): 122289507
Help
Entry
122289507 CDS
T08745
Name
(RefSeq) probable CoA ligase CCL9
KO
K22133
oxalate---CoA ligase [EC:
6.2.1.8
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00630
Glyoxylate and dicarboxylate metabolism
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122289507
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.8 oxalate---CoA ligase
122289507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GH3
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
122289507
NCBI-ProteinID:
XP_042952488
LinkDB
All DBs
Position
12:26694758..26696993
Genome browser
AA seq
525 aa
AA seq
DB search
MENHLTLTGLLKKAASEFPSRRALSVSGKLDITHLRLQQLIDNAATLLRASGISPGDVVA
LVFPNTVEFVVMFLAVIRCRATAAPLNPAYTAEEFEFYLSDSESKLLITPKEGIQSALTA
ASKLKITHVTATLPDPESGISISTSGDDSISNDSVSEVVNDPSDVALFLHTSGTTSRPKG
VPLTQLNLASSVLNIKSVYKLTELDSTVLVLPLFHVHGLIAGLLSSLVSGAAVTLPAAGR
FSASTFWSDMVAYRATWYTAVPTIHQIVLDRHHSKPEPFYPKLRFIRSCSASLAPTVLDR
LEEAFGAPVLEAYAMTEASHLMASNPLPENGVHKSGSVGKPVGQEMAILDENGLRQPEGV
SGEVCIRGPNVTKGYKHNPEANKGAFTFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGE
KISPIEVDAVLLSHPEIAQGVAFGVPDDKYGEEINCAVIPREDSKIDEAEVLQFCKKNLA
AFKVPKKVFITDDLPKTATGKIQRRFVAEHFLAQISTAKVPKFGA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcatctcaccttaactggcttgttgaagaaagccgcatcggaatttccctcc
cggcgagctctttcggtctccggaaaactcgatatcacccatctccgattgcaacagctt
atcgataacgccgccactcttctgcgtgcctccggtatcagccctggtgacgtcgtcgcc
ctcgtctttcctaacaccgtcgagtttgtggtgatgttcttggccgtaattcgatgccga
gccacggctgcgccattgaaccctgcatacacggcggaagagttcgaattctacctctct
gactcagaatcgaagcttctcatcacaccgaaagaaggtattcaatcggctctaaccgcg
gcttctaaactcaaaatcactcacgtgaccgccactctgcccgaccccgaatcaggaatc
tccatctccacttcgggagacgattccatctccaacgactcggtctccgaagtcgtcaat
gacccgtccgatgtggctctattcctgcatacttccggtaccacgagccggccaaaagga
gtgcctttgactcagctcaacctggcgtcctcggttttaaatatcaaatcggtttacaaa
ctcactgagttggactcgaccgtgctcgtccttcccctgttccatgtccacggattgatc
gccgggttattgagttcgctcgtttccggagccgccgtgaccctcccagcagccggtcga
ttctcggcatcgacgttttggtccgacatggtcgcttaccgcgcgacgtggtacaccgcg
gtccccaccatccaccaaatcgtcctagaccgtcatcacagcaaaccggagcccttttac
ccgaagcttcgcttcatccgcagctgcagcgcgtcgctggctccaaccgtactggatcgg
ttggaggaggcattcggagcaccagtgctggaagcctacgcgatgacggaggcatctcat
ctcatggcgtcgaacccgttaccggagaacggcgtgcacaaatccgggtcggtgggcaaa
cccgtgggccaggaaatggcgattctggacgagaacgggctccgacaaccggagggtgtc
agcggcgaggtgtgtatacggggaccaaacgtgaccaaaggttacaagcacaatccggag
gccaataagggagcgtttacattcggatggttccataccggtgacgtcgggtatttggac
tccgacggatatctgcatctcgtgggtaggatcaaggagctcatcaaccgcgggggggag
aagatatccccgatcgaagttgacgcagtgcttttatctcatccggagattgctcagggt
gttgcgtttggagttcccgatgataaatatggcgaagagataaattgtgccgtaattccc
agagaagatagcaaaatagacgaagcggaggtgctgcaattttgcaagaagaatctggca
gctttcaaggtccccaagaaggttttcatcaccgatgatcttccaaaaactgccaccgga
aaaattcagcgccggttcgtagctgagcatttcctcgctcaaatctccaccgcgaaagtt
ccaaagtttggagcttaa
DBGET
integrated database retrieval system