Carya illinoinensis (pecan): 122289534
Help
Entry
122289534 CDS
T08745
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial-like isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03030
DNA replication
cill03410
Base excision repair
cill03420
Nucleotide excision repair
cill03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122289534
03410 Base excision repair
122289534
03420 Nucleotide excision repair
122289534
03440 Homologous recombination
122289534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122289534
03400 DNA repair and recombination proteins [BR:
cill03400
]
122289534
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122289534
DNA replication proteins [BR:
cill03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
122289534
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
122289534
NER (nucleotide excision repair)
GGR (global genome repair) factors
122289534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
122289534
NCBI-ProteinID:
XP_042952559
LinkDB
All DBs
Position
12:complement(29802002..29814204)
Genome browser
AA seq
1073 aa
AA seq
DB search
MAMGLCTQTGPIRPSCPTYPMFSRSCSRPSSTSRSLCASSRSLRTLRRCTFRNDKNYHTE
SCCWSLLPRSNSIAKMVLDYRDHENSNGSLTRKRIDAIRRVDKEGEQVQSGFIVPPAQDV
GGSSPDKPSAFDTVSESTVPGCQWAKEAKRLRVRRELLLKMFKYGSYLPHETSSQENIFS
TNGGRQIVAPDLASDPASPELKCGGDSKIAVKDMNGLKLDQSRQGLCSVDNIRKVALPSA
DASRNSEEIKQTSSGFNNGLIKTATSEQTNHQSDLHKRLSSIYDDVLVVNNVTIAKEVVR
VLTNKFRHLVHACDTEVAKIDVKQETPVDHGEIICFSIYSGPEADFGNGKSSVWVDVLDG
GGSDLLVEFSPFFEDPTIKKVWHNYSFDNHVIENYGIKLSGFHADTMHMARLWDSSRRTE
GGYSLEALTGNKRVMSGSPFCDEEELFGKVSMKTIFGKRKVKKDGSEGKMISISPVEELQ
REERKPWICYSVLDAKSTLKLYESLKSQLSTMPWKLDGKPVSGKSMYDFYEEYWRPFGDL
LVKMETEGILVDRAYLAEVEKIAKAEQEVAAKRFRNWASRYCSDAKYMNVGSDAQLRQLF
FGGIANRKDSDEVLPNERIFKIPNVDKVIEDGKKSPTKFRNIRLRSILGFPLPADMFTAT
GWPSVSGDALKTLAGKVSAEHGLMNDACDLQLDENIENVSENEVSEKENSTSGNDKSAYG
TAFLAFKEEWEGREACHAIAALCEVCSIDSLISNFILPLQGSNISGKNGRIHCSLNINTE
TGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLIVADYGQLELRILAHLASCKSMLD
AFRAGGDFHSRTAMNMYPYIREAIDKKQVLLEWHPQPGEDKPPVPLLKDAFASERRKAKM
LNFSIAYGKTPVGLARDWKVSVKEAKKTVDLWYSDRQEVLTWQEKRKQEARDQQFVCTLL
GRARRFPSMARATSYQKGHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQ
VHDEVILEGPTETAEVAEAIVVECMSKPFNGKNILKVDLSVDAKCAQNWYSAK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggctatggggctgtgcacccaaaccggtcctataagaccgtcttgcccaacttatccc
atgttttcacggtcttgttcccgaccttcttccacttctcggtccctctgtgcttcctct
agatccctgcgcacactacgaagatgcacattccggaatgacaagaattatcacacggaa
tcgtgttgttggagcctcttgccacgttctaattcaatagctaagatggtccttgactat
agagatcatgaaaattctaatggaagtctcacacggaaaagaattgatgctatccgaagg
gtagataaagaaggggagcaggttcaaagtggttttattgtaccaccagctcaagatgtt
gggggaagtagtcctgacaaacccagtgcttttgataccgtgtctgaaagtactgtgcct
ggatgccaatgggcaaaagaggcaaaaaggctgagagttagaagggaacttctgcttaaa
atgtttaaatatggtagttatctaccccatgaaacaagtagtcaagaaaacatattttct
acaaatggtggaaggcagattgttgcacctgacttggcttctgacccagcttctcctgaa
ctaaagtgtggtggagacagcaaaatagccgtgaaagatatgaatggtctaaaacttgac
cagtcaaggcaaggtctatgttcagtagacaatataagaaaggttgccctgcccagtgct
gatgcatcaaggaactcggaggaaataaaacaaacaagttctggctttaacaatggttta
atcaaaactgccaccagtgaacagacaaatcaccagtcagatcttcataagaggctcagt
agcatctatgatgatgttctcgttgtcaataatgtcaccatagcaaaggaggttgtcagg
gtgcttacaaataagtttagacatctggtccatgcatgcgatactgaggttgcaaagata
gatgtgaagcaagaaacacctgttgatcacggggaaatcatatgcttcagtatatattct
ggaccagaagcggattttggaaatgggaagtcttctgtttgggttgatgttcttgatggt
ggtggtagtgatcttttggtcgagttttcccctttctttgaagacccaaccataaaaaag
gtttggcacaactatagctttgataaccatgttattgagaactacgggattaagctttct
ggttttcatgctgacacaatgcatatggcacggctgtgggattcgtcacgacgaactgag
ggtgggtattctcttgaagcacttactggaaacaaaagggttatgtctgggtctccattt
tgtgacgaagaagagttatttggtaaagtttcaatgaaaaccatctttgggaagagaaag
gttaaaaaagatggatcagaaggcaaaatgatttccatttctcctgttgaagagctgcaa
agagaagagcggaaaccatggatatgttattctgtcttagatgcaaagagcacactaaag
ctttatgagagcttgaaaagccaactatcaactatgccatggaaacttgacggaaaacca
gtttctggaaaatccatgtatgacttctatgaggaatattggcgaccatttggtgatcta
ttagttaaaatggaaactgaaggaatactggttgatcgagcatatcttgctgaggtggaa
aagatagccaaagcagaacaagaagttgctgctaaaagatttcgcaactgggcatccaga
tattgttctgatgccaaatacatgaatgtgggaagtgatgcacaactacgccagctcttt
tttggtggcattgcaaatagaaaggattctgatgaggttcttccaaatgagaggatcttc
aaaatacctaatgttgataaagtgattgaagatggcaagaagagccccacaaaatttcgg
aatattaggctgcgtagcatccttggttttccactaccagctgatatgttcacagcaact
ggttggccctcagttagtggtgatgctttgaagactctggctggaaaggtttctgcagaa
catggtttgatgaacgatgcttgtgacttgcaactggacgaaaacattgaaaatgtctct
gaaaatgaagtttcagaaaaagaaaattcaactagtggtaacgacaaatctgcttatgga
acagcttttctagctttcaaagaagagtgggaggggagggaagcttgccatgccattgct
gctttatgtgaagtttgctccattgactcgttgatatccaatttcatactccccttgcag
ggaagtaatatatcaggcaagaatgggcgtattcattgttcattgaatatcaatacagaa
actgggcgcttatcagctaggagaccaaatttgcagaatcagcctgccctagagaaggac
cggtataagatccggcaggcattcatagctgcacctgggaattcacttattgttgcagat
tacgggcaactggaacttaggattcttgcacatcttgctagttgtaagagcatgctggat
gcctttagagctggtggagatttccattcaaggactgcaatgaatatgtacccatatatt
cgtgaagctattgacaaaaagcaagtgcttctcgagtggcatccccaacctggtgaagat
aaacccccagttccgctattaaaggatgcctttgcttctgaaagaaggaaagcgaaaatg
cttaacttttccattgcatatggaaagactccggtggggcttgcccgagattggaaggtt
tctgttaaggaagcaaagaaaactgttgatctgtggtacagtgatagacaagaagtgcta
acctggcaagaaaagcgtaaacaagaggcccgtgatcaacagtttgtatgcacactactg
ggacgtgcccgccggttcccttcaatggcccgtgctacctcctatcagaaaggtcacatt
gagcgagctgctatcaatactccagtgcagggtagtgctgctgatgttgccatgtgtgcc
atgctagaaatatcaaaaaatgcacgattgaaggagcttgggtggaagctgcttttacag
gttcatgacgaagtaattttggaaggacccacagagacagctgaggtcgcagaggccata
gttgttgagtgtatgtccaaacccttcaacggcaagaatatccttaaagttgacttatct
gttgatgcgaagtgtgctcaaaactggtattctgccaagtag
DBGET
integrated database retrieval system
