Carya illinoinensis (pecan): 122289546
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Entry
122289546 CDS
T08745
Name
(RefSeq) ribonuclease TUDOR 1-like isoform X1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
cill
Carya illinoinensis (pecan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
122289546
NCBI-ProteinID:
XP_042952587
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Position
12:183128..191444
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AA seq
991 aa
AA seq
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MASSTAGVTGWYKGKVKAVPSGDCLVIMAMTANRPGPPPEKTLTLSSLIAPRLARRGGVD
EPFAWESREYLRKLCIGKEVAMRVDYTVPSIGREFGSVFLGDKNVALMVVSEGWAKVREQ
GQQKGEASPFLQELLRLEDQAKEQGLGRWSKVPGAAEASIRNLPPSAIGDPSNLDAMGLL
AANKGRPMQGIVEQVRDGSTIRVYLLPDFQFVQVFVAGIQAPSMGRRAVTEIAAETEGKT
EEPNGDVSAQSRAPLTSAQRLAVSAVSSAEVSPDPFGVEAKYFTELRVLNRDVRIVLEGV
DKFSNLIGSVYYPDGDSAKDLALELVENGLAKFVEWSANMMEEDAKRRLKAAELQAKKSR
LRFWTNYVPPATNSKAIHDQNFTGKVVEVVSGDCIIVADDSVPYGSPLAERRVNLSSIRC
PKMGNPRRDEKPAPYAREAREFLRTRLIGRQVNVQMEYSRKVSMADGSAAATGIADSRVM
DFGSVFLSSPIKVEGDDTPSPATPTSGSQPGVNIAELVVARGFGTVIRHRDFEERSNYYD
ALLAAESRAIAGKKGLHSAKDPPVMHITDLLMAPAKRAREFLPYLQKSRRVPALVEYVLS
GHRFKLLIPKDTCSIAFSFSGVRCRGRDEPYSDEAISLMRRKIMQRDVEIEVETVDRTGT
FLGSMWESKTNLAVTLLEAGLAKLQTSFGSERIPDINLLEQAEKSAKSQKLKIWENYVEG
EEVSNGAAVESKQKEVLKVMVTEVLGGGKFYVQTVGDQKVASIQQQLDSLNLQEAPVGGA
FNPKKGDIVLAQFSADNSWNRAMIVNAPRVAVESTKDKFEVFYIDYGNQEFVVYSQLRPL
DPSVSSASGFAQLCSLAYIKVPNLEEDFGQEAAEYLSEHVLNGSKEFRAKVEEKDTSAGK
VRGQGTGTTLIVTLVAVDAEISINAAMLQEGLARLEKRKKWESKERQLALDNLEKFQEEA
RTARRRMWQYGDIQSDDEDTAPPARKAGGRR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcaacagccggggtcacaggttggtacaaaggaaaagtgaaagctgttcct
tcgggagactgcttggttatcatggccatgactgcgaacaggcctggaccaccacctgag
aagacccttactttgtcatcccttattgctccaagactggcccgtagaggtggtgttgat
gagccatttgcctgggaaagcagggagtatttgcgaaaactatgcataggaaaggaggtt
gcgatgagagtggattacactgtaccatccattgggcgagaatttggctctgttttcctt
ggtgacaaaaatgttgctttgatggtggtttctgaaggctgggcaaaggtcagggagcag
ggtcaacagaaaggagaagcgagtcctttccttcaggaactgctacgtctggaagatcaa
gctaaggaacaaggtcttggtcgctggagcaaggttccgggtgctgctgaggcatctatc
agaaatctgccaccttctgctattggtgatcctagcaacttggatgccatggggttgtta
gctgcaaacaagggcagacccatgcaaggtattgtcgagcaggttcgtgatggcagtacc
atccgggtttatttgcttccagattttcagtttgtccaagtgtttgttgcaggaattcag
gccccatctatgggaagaagagctgtaactgaaattgctgctgaaacagaaggcaagact
gaagaaccaaatggagatgtttctgctcaatctcgagctcctctaacatctgcacagagg
cttgcagtctccgcagtatcatctgctgaagtttctcctgatccatttggtgttgaagcc
aaatattttactgagcttcgtgttttgaacagagatgttcgtattgtcctggaaggtgtt
gacaaattcagcaatttgattggatcagtatactatcctgatggggactcagcaaaagac
ctggctctggagcttgttgagaatggcttagctaagtttgttgaatggagtgcaaatatg
atggaggaagatgccaaacgaaggctgaaggctgcagagcttcaagccaagaaaagcagg
ttgaggttctggacgaactatgtgcctccagcaacaaattcaaaggcaatccatgaccag
aatttcacaggaaaggtggtggaggttgtaagtggggactgcattattgttgctgatgat
tctgtcccttatggcagtccattagcagagcggcgagtcaatctgtcaagtattaggtgt
ccaaaaatgggtaatcctcgcagagatgaaaagccagctccctatgcacgtgaagcaagg
gagtttttaagaacacgactaattggcagacaagtgaatgttcaaatggaatattctagg
aaagtgagcatggcagatggatctgctgctgctactgggattgctgattccagagtaatg
gattttggttctgttttcctctcatcgccaattaaggttgagggggatgataccccctca
cctgctacgcccacttctggcagccaacctggtgtgaatattgctgaacttgtagttgca
cgtggctttggtactgttattcggcaccgagattttgaagagagatcaaactattatgat
gcccttcttgctgctgaatcccgtgccattgctgggaagaaaggtctccattcagccaag
gatcctccagtcatgcatattacagacctgctaatggcaccggccaagagagctagagaa
tttttgccatacctacaaaagagcaggagagttcctgctcttgtggaatatgtcctcagt
ggtcaccgatttaagctgctgattcccaaggacacgtgcagcattgcattctcattctct
ggtgtgaggtgtcgtggtcgtgatgagccgtattctgatgaagcaatttcactaatgaga
agaaagattatgcaaagagatgttgagattgaagtcgaaactgttgatagaactggaact
ttcttgggatccatgtgggaatcaaagacaaatcttgcagtgacgctccttgaagctggc
cttgcaaaacttcaaacttcctttggtagtgaaaggatccctgacattaaccttcttgaa
caagctgagaaatctgctaaaagccaaaaactgaaaatttgggagaattacgttgaaggg
gaagaagtgtctaatggtgcagctgttgaaagcaaacagaaagaagtactaaaggtgatg
gttacagaagtcttgggtggtggtaaattttatgtgcagacagttggggatcagaaagtt
gcctcgattcaacaacagcttgattctttaaatcttcaagaagctccagtaggtggtgct
tttaatcctaaaaagggtgacatagtccttgctcaatttagtgctgacaattcctggaac
cgagcaatgatcgtcaatgcacctcgagtagctgtggaatctacgaaagacaagtttgaa
gttttctacattgattatgggaatcaagaatttgttgtgtacagtcagttacggcctctt
gatccttccgtgtcttctgcatctggttttgctcaactatgtagccttgcttacataaag
gttccaaatttggaggaagattttggtcaagaagcagccgagtatctgagtgagcacgtg
ttgaatggttcaaaagagttcagggccaaggttgaggaaaaggatacttcagccggaaaa
gttagaggacagggaactgggaccactcttattgtaactcttgtggctgtggatgctgag
attagtataaacgctgccatgcttcaggaaggacttgctagactagaaaagaggaagaaa
tgggagagcaaggaaagacagttggccttggataatttggagaagttccaggaagaagca
cggactgctaggcgaaggatgtggcagtatggagatatccaatcagatgatgaggataca
gcgcctcctgctagaaaggctggtggccggcgatga
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