Carya illinoinensis (pecan): 122289576
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Entry
122289576 CDS
T08745
Name
(RefSeq) YTH domain-containing protein 1-like isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122289576
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122289576
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
122289576
NCBI-ProteinID:
XP_042952645
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All DBs
Position
12:27384543..27443382
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AA seq
405 aa
AA seq
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MSSDTAKENASVVDSSVTEWKQDMGNSDDPESFSYKGNEGSYPPSRAEKAGNSCDLLGIS
TTNKKGRLYNTRYFIIKSLNHHNIELSIEKGIWATQVMNEPILEEAFHNSGKVILIFSVN
MSGFFQGYAQMMSSVGWRRDNVWSQGNGKSNPWGRSFKVKWLCLNDLPFQKTFHLKNPLN
DYKPVKISRDCQELSPDIGEALCELLDAKSDVDDSQSSFYRNDLPSKRLCVESPCSLGDE
DYNVPQMHMSWSRTPILYPSLLYPHQVEANRIHLGNQSSAGVTFSKNPPMTTGASKVERM
KRSHINGDFTNLRVEMDMSPRFDSWGLSAESPHASTLTEDDFLEMSYEEYLEHTRSSKQL
CLPVAGPSGKIQESSRSKKHDENLNSSSKADRCCSRKRTHCSSQK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatactgcaaaagaaaatgcatctgtagttgattcatcagtgactgaatgg
aaacaagatatgggaaattcggatgacccagagagctttagttacaaaggtaatgagggc
agctaccccccatcaagggcggagaaagcagggaactcttgtgatctacttgggatttca
acaactaacaaaaagggtagattgtacaatacgagatatttcatcattaagagtttgaac
catcacaacatcgaactctcaattgagaaaggaatttgggctactcaagtcatgaatgaa
cctattcttgaagaagccttccataactctggtaaagtaattcttatatttagtgtaaac
atgagtggcttcttccaagggtacgcccaaatgatgtcttctgttggttggaggcgggac
aatgtttggagtcaaggaaatggcaaaagcaatccctgggggcgcagctttaaggtcaag
tggctgtgtttaaatgacttaccttttcaaaagacttttcatctcaagaacccactgaat
gactacaaacccgtcaaaattagccgggattgccaggagttatctccagatattggagaa
gctctatgcgagctccttgatgcgaagagtgatgtggatgactcgcagagtagtttttac
aggaacgatcttccttcgaaaaggctttgtgtagagtctccatgttctttaggggatgaa
gactacaatgtgcctcaaatgcatatgtcatggtccagaacacccatcctttatccttca
ctgctgtatccacatcaggttgaagcaaatagaattcatttaggaaaccagagttctgca
ggggttaccttttctaaaaatccgcctatgactactggtgcatcaaaagttgaaaggatg
aaacgttcccacattaatggagactttaccaatttacgagtggaaatggatatgtctcct
cgttttgatagttggggtttgtcagcagaaagcccgcatgctagtactctgacagaggat
gatttccttgaaatgtcttatgaagaatatctggagcataccagaagcagcaaacagtta
tgcctccctgttgctggaccgtctgggaaaattcaggagtcatcaagaagcaaaaagcat
gatgaaaatttaaattcaagctctaaagctgaccggtgttgctcacgtaagaggactcat
tgttcatctcagaaataa
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