Carya illinoinensis (pecan): 122289604
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Entry
122289604 CDS
T08745
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122289604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122289604
Membrane trafficking [BR:
cill04131
]
Endosome - Golgi transport
Others
AP-4 complex
122289604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
INTS1_R4
HEAT_2
HEAT
Cnd1
TOR1L1_N
HEAT_EZ
PDS5
NPHI_C
Motif
Other DBs
NCBI-GeneID:
122289604
NCBI-ProteinID:
XP_042952691
LinkDB
All DBs
Position
12:complement(22719039..22730638)
Genome browser
AA seq
981 aa
AA seq
DB search
MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRISEPD
IPKRKMKEYIIRLVYIEMLGHDASFGYIHAVKMTHDDTLLLKRTGYLAVTLFLNDDHDLI
ILIVNTIQKDLRSDNYLVVCAALNAVCRLINEETIPAMLPQVVDLLAHSKEAVRKKAIMA
LHRFYQKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITIEVHSYKDLVVSFVSIL
KQVAERRLPKSYDYHQMPAPFIQIRLLKILALLGSGDKQASENMYTVVGDIFRKCDSSSN
IGNAVLYECVCCVSSIYPNPKLLEAAADVISRFLKSDSHNLKYMGIDSLGRLIKMSPEIA
EQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMISINDNHYKTDIAS
RCVELAEQFAPSNHWFILTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGEDDDAADSQLRS
SAVESYLHIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEACSNDETVK
AYAVTALMKIYAFEIAAGRKVDMLHECQSLVEELSASHSTDLQQRAYELQAVICLDAHAV
ENIIPSDASCEDVEIDKNLSFLNSYVQQSMENGAQPYIPETQRSGMLDTNFRSQDQPEAS
LHGLRFEAYELPKPPVPSRIHTASLEPSTELVPASEPAYPKDTHQVATVPSVSDAGSSEL
KLRLDGVQRKWGRPAYSSSAPSPSSSTSQNTVNGVTQIDAAGSVISKAHKTNDSRKPRVE
ISPEKQKLAASLFGGSSQTEKRSTSASHKVTKAVSHAAGKSQAPKSAVVSNQVTVEKTIH
QPPPDLLDLGEPAVPSTTPSVDPFKQLEGLLDPTQVSSTANHGAVGAATESPDIIALYGK
TPASGHSSSAAISLPTNGDGVNFTAGLLDATLSTAHAGTTLPTQSIKGLNAKDSLEKDAL
VRQMGVTPSSQNPNLFRDLLS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgaagacgataggtagggagctggccatgggttctcaaggcgggttcggt
cagtctaaggagttcctggacctggtgaagtccatcggcgaggcccgatccaaggccgag
gaggaccgcatcgtactccacgagatcgaaaccctcaagcgtcgcatctccgaacccgac
attcccaagcgcaagatgaaggagtacatcatccgcctcgtctacatcgagatgctcggc
cacgatgcctccttcggctacatccacgctgtcaaaatgacccacgacgacaccctcctc
ctcaagcgaaccggttacctcgccgtcactctcttcctcaacgacgaccacgaccttatc
atccttatcgtaaacactattcagaaggacctgaggtctgacaactacctcgtggtctgc
gcggctctcaatgcggtctgccggctgatcaacgaggagaccattccggccatgcttccg
caggtggtcgacctgctcgcccactccaaggaggctgtcaggaagaaagccatcatggcg
cttcaccgattctaccaaaagtccccctcttctgtctcccacctcgtctctaatttccgc
aagaggctctgtgataatgatcctggggtcatgggtgcaactctctgccctctttttgat
cttataaccatagaagttcattcttataaggatttagttgtaagctttgtaagcattctt
aaacaagtagcagaacgcagattacctaagagttatgattatcatcagatgccggctcca
tttattcagatcaggttgctgaaaattctggcattgctgggaagtggtgacaagcaagca
agtgaaaatatgtatactgttgttggcgacatattcaggaagtgtgattcatcaagtaac
ataggaaatgctgtcctctatgagtgcgtatgctgtgtttcttctatatatcccaaccct
aaattattagaagctgctgctgatgttatttccagatttttgaagagtgacagtcacaat
ttgaaatatatgggtattgattcccttggtcgattgataaagatgagtcctgagatagct
gaacaacaccaactcgctgtgattgactgcttagaggacccagacgatactttgaagaga
aaaacctttgaactattgtataaaatgaccaagtcctccaatgttgaagtgattgtggac
cgaatgattgattacatgataagcattaatgataatcattacaaaactgatatagcatct
cgatgtgtggagcttgcagagcaatttgcacccagtaaccattggtttatcctgaccatg
aataaagtattcgagcatgccggagatctggtgaatgtaaaagtggcacacaacttgatg
cggttaattgctgagggatttggcgaggatgatgatgctgctgatagtcagctgagatcg
tctgctgtggagtcatatttgcacattatcggggagccaaagcttccgtctgtatttctt
caagtcatttgttgggttttgggggagtatggaacagctgatgggaagtattctgcttct
tatattactgggaaattatgtgatgtggcagaggcatgttcaaatgatgaaactgtaaag
gcatatgcagttacagcactcatgaaaatatatgcatttgaaatagcagctggaagaaaa
gtggatatgttacatgagtgtcaatccttggttgaagaattatcggcttcccactcaaca
gatttgcagcaacgtgcatatgaattacaagcagtcatttgcttagatgctcatgctgtc
gagaatattataccatcagacgcaagttgtgaagatgtagagatagataaaaacctctca
ttcctaaacagttatgtccaacagtcgatggaaaatggtgctcagccctacattcctgag
actcagcgctctggcatgttggataccaacttcagaagccaagaccagcctgaagcttcg
ttgcatggtcttaggttcgaggcatatgagcttccaaagcccccagtgccatcaagaata
catacagcttcacttgagccctcaactgaacttgttccagcatctgagccagcttatcct
aaggacacccatcaggttgctactgtgccatctgtatcagatgcagggtcatcagaactg
aagctacgacttgatggtgttcagagaaagtggggtagaccagcatactcctcttctgcg
ccatctccctcaagttctacttcccagaatacagtgaatggggtcactcaaatagatgct
gcaggcagtgtaatttcaaaagcacacaaaactaatgattcgcggaaaccacgagttgag
atttctccagaaaagcagaagcttgcagcttcattgtttgggggatcttctcaaactgag
aagagatccacttcggctagccataaggttactaaagcagttagccatgctgcagggaag
tctcaggcaccaaagtcagcagttgtatccaatcaagtgacagtggagaagacaattcat
caacctcctccggacttgcttgacttgggggaaccagctgttccaagtactactccatct
gtggatccattcaagcagttagaagggcttcttgacccaactcaagttagttcgacagca
aatcatggtgcagttggtgctgctacggaatcacctgatattattgcactatatggaaag
acacctgctagtgggcatagcagcagcgctgcaatttctttgccaaccaacggggacggt
gtcaatttcacagctgggctattagatgcaactctcagcaccgctcatgcaggtaccaca
cttccaacacaatctataaagggtctgaatgctaaagattccttggaaaaggacgcactc
gtgaggcagatgggtgtgactccatcaagccaaaatcctaacttgttcagagatttgcta
agctaa
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