Carya illinoinensis (pecan): 122289606
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Entry
122289606 CDS
T08745
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122289606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122289606
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122289606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
SelB_WH_2nd_bact
Motif
Other DBs
NCBI-GeneID:
122289606
NCBI-ProteinID:
XP_042952696
LinkDB
All DBs
Position
1:complement(54898239..54907134)
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AA seq
272 aa
AA seq
DB search
MDEQGGSTRSGQKNGNGNNIIEEFLDTSKAERAMWLMKCPPLVSRSLQFPPDASDPARPV
AKVVLSIDPLRSNDDSSPQFTMELAGTEAGHIPKCYSMDMSKDFIPMSVFSESSQGKCSV
EGKILNKFDMKPHNQDIENYGKLCRERTNKYMTKSRQIQVIDNDNGAHMRPMPGMMISVA
SGPSDKKKMPAKGSDVKRTRRDRGEMEEIMFKLFERQPNWTLRQLIQETDQPEQFMKDIL
KDLCVYNNKGANQGSYELKPEYRRTNEDPTPK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcaaggaggcagcaccagaagcggccagaaaaatggcaacggcaacaatatt
atcgaggagttcttggacacgagcaaagcggagagagcaatgtggctcatgaaatgccct
cccctcgtctctcgctctctccagtttcctcccgatgcgtccgaccctgctcgccccgtt
gccaaagtcgtcctctccatcgacccactccgctccaatgatgactcctctcctcagttc
accatggaattggctggcactgaagctggacatatacccaagtgttactctatggatatg
tctaaagacttcattccaatgtctgtgttttctgagtcatcacaagggaagtgttctgtg
gagggaaaaatattgaacaagtttgacatgaagccccataaccaggatattgagaactat
gggaaactctgccgtgaaagaacaaataaatatatgactaagagtagacagatacaggtg
attgacaatgataatggggctcatatgaggcctatgccagggatgatgattagtgtggct
tctggaccgagtgataagaagaaaatgccagctaagggctcagacgtgaaaagaacaaga
agggatcgcggtgaaatggaagaaattatgttcaagctgtttgaaaggcaaccaaattgg
actttaagacagcttattcaggagacagaccaaccggaacaatttatgaaagacatactc
aaagacctgtgtgtctacaataacaagggagctaaccaaggatcttatgagctgaagccg
gaatacaggagaacaaatgaggatccaactcccaaatag
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