Carya illinoinensis (pecan): 122289649
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Entry
122289649 CDS
T08745
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122289649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122289649
Membrane trafficking [BR:
cill04131
]
SNARE
SNAP-25[C] (Qc)
STX8
122289649
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Gene cluster
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
NPV_P10
DUF2976
CLZ
YjcZ
Motif
Other DBs
NCBI-GeneID:
122289649
NCBI-ProteinID:
XP_042952766
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All DBs
Position
12:30266017..30270867
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AA seq
233 aa
AA seq
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MASSADSWMKEYNEALKLADDINGMISERSSFPASGPDAQRHGSAIRRKITILGTRLDSL
QSLLLKLPGKHPVSDKEMNRRKDMLANLRSKVNQMASALNMSNFANRDSLLGPEIKPAEA
TTRAAGLDNSGIVGLQRHVMKEQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDE
RVDITDSRLQRVQKHLAILNKRTKGGCSCMGLLLSVIGIVVLVAVIWLLIKYL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctgcagactcatggatgaaggaatataatgaagccctaaaacttgctgat
gatatcaatggtatgatttctgaaaggagttcatttccggcatcaggtccagatgctcag
cgccatggatctgctatacggaggaagatcacaatattagggacaagacttgatagctta
cagtcccttttgttgaagctccctggaaaacatccagtgtcggataaggagatgaatcgt
cgcaaggacatgcttgcaaatctgagatcaaaagttaaccagatggcttcagcattgaac
atgtcaaactttgcaaacagggacagcttgcttggcccagaaataaagccagctgaggcc
acaaccagagcagctggcttggacaactctggcattgttgggcttcaacgacacgttatg
aaagagcaagatgagggtcttgagaagttggaggagactgttgtaagtacaaaacatatt
gcactggcagtcaatgaagaacttgacctacacactaggctgattgatgacttggatgag
cgtgtggacattacggacagcaggttacagcgggtgcagaagcatttggcgattttgaat
aagcgcactaagggtggttgctcttgcatgggtttgctcttatcagttattgggattgtg
gttctggttgctgtcatatggttgttgataaaatatttgtaa
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