Carya illinoinensis (pecan): 122289661
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Entry
122289661 CDS
T08745
Name
(RefSeq) myb family transcription factor PHL11 isoform X1
KO
K28175
GARP family transcription factor, PHR1 subfamily
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122289661
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122289661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_CC_LHEQLE
Myb_DNA-binding
DUF1104
Pep_M12B_propep
FIMAH
Motif
Other DBs
NCBI-GeneID:
122289661
NCBI-ProteinID:
XP_042952783
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Position
12:24503173..24506365
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AA seq
276 aa
AA seq
DB search
MERNYGGGSGRYPYEDGVVMTRDPKPRLRWTAALHDRFVDAVTKLGGPDKATPKSVLRLM
GMKGLTLYHLKSHLQKYRLGQQSLRQNTTEQAKESSGSTYVHFSNHSLGTSTNSSRSDNE
QGEIPLAEALKHQLEVQKRLQEQLEVQRKLQMRIEAQGKYLQVILEKAQKSLSPGSVEAA
RAQLNDFNSALSNLMENMNEEERKERMLEMNDIYRKANGSTIQNYCEGEGGGGGGEHKDA
KLEVERGLIQFDLNTKGNYDFAAADGAGFGTPNAFL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaattacggaggtggaagcggcagatatccgtatgaggatggggtggtgatg
acgagagacccgaagccgaggctaaggtggacggctgctctgcacgaccgctttgtcgat
gctgtcactaaacttggtggccccgataaagcaactccgaagtctgtgctgaggttgatg
ggcatgaagggcttgacactataccatctgaagagtcatttacagaaatacagacttgga
cagcagtcgctgagacaaaatactacagaacaagccaaagagagcagtgggagcacctat
gtacatttcagtaatcactccttggggactagtaccaattcttcaagaagtgataatgaa
caaggagaaatcccacttgcagaagcgctcaagcatcagctcgaagttcagaaaagatta
caagagcagcttgaggtacagaggaagctgcagatgagaatagaggcccagggaaagtac
ttgcaagttatattggagaaagcgcaaaagagtctctccccaggtagtgtagaagcagca
agagctcagttaaacgacttcaattcagctctatccaacctcatggagaatatgaatgaa
gaagagagaaaagaacgcatgctagagatgaatgacatttatagaaaggccaatggttca
accatccaaaactattgcgagggagagggaggaggaggaggaggagaacacaaggatgct
aaactcgaggtagaacgtggtctgatacaatttgacttgaataccaaaggtaattatgac
tttgctgctgcagatggagctggctttggaaccccaaatgctttcctatag
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